Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4665 | 14218;14219;14220 | chr2:178739240;178739239;178739238 | chr2:179603967;179603966;179603965 |
N2AB | 4348 | 13267;13268;13269 | chr2:178739240;178739239;178739238 | chr2:179603967;179603966;179603965 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4302 | 13129;13130;13131 | chr2:178739240;178739239;178739238 | chr2:179603967;179603966;179603965 |
Novex-1 | 4427 | 13504;13505;13506 | chr2:178739240;178739239;178739238 | chr2:179603967;179603966;179603965 |
Novex-2 | 4494 | 13705;13706;13707 | chr2:178739240;178739239;178739238 | chr2:179603967;179603966;179603965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | None | N | 0.243 | 0.091 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1533 | likely_benign | 0.1782 | benign | -0.1 | Destabilizing | None | N | 0.21 | neutral | None | None | None | None | N |
K/C | 0.4724 | ambiguous | 0.5046 | ambiguous | -0.079 | Destabilizing | 0.676 | D | 0.297 | neutral | None | None | None | None | N |
K/D | 0.2419 | likely_benign | 0.2621 | benign | 0.07 | Stabilizing | 0.038 | N | 0.345 | neutral | None | None | None | None | N |
K/E | 0.0927 | likely_benign | 0.1008 | benign | 0.107 | Stabilizing | None | N | 0.178 | neutral | N | 0.445002694 | None | None | N |
K/F | 0.5156 | ambiguous | 0.5669 | pathogenic | -0.088 | Destabilizing | 0.356 | N | 0.323 | neutral | None | None | None | None | N |
K/G | 0.2316 | likely_benign | 0.2626 | benign | -0.366 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
K/H | 0.1851 | likely_benign | 0.1964 | benign | -0.65 | Destabilizing | 0.214 | N | 0.309 | neutral | None | None | None | None | N |
K/I | 0.2255 | likely_benign | 0.2601 | benign | 0.542 | Stabilizing | 0.093 | N | 0.35 | neutral | D | 0.571782789 | None | None | N |
K/L | 0.2163 | likely_benign | 0.2456 | benign | 0.542 | Stabilizing | 0.038 | N | 0.396 | neutral | None | None | None | None | N |
K/M | 0.1212 | likely_benign | 0.1386 | benign | 0.359 | Stabilizing | 0.356 | N | 0.315 | neutral | None | None | None | None | N |
K/N | 0.149 | likely_benign | 0.1657 | benign | 0.212 | Stabilizing | None | N | 0.233 | neutral | N | 0.436681842 | None | None | N |
K/P | 0.6216 | likely_pathogenic | 0.7072 | pathogenic | 0.358 | Stabilizing | 0.072 | N | 0.371 | neutral | None | None | None | None | N |
K/Q | 0.1052 | likely_benign | 0.1084 | benign | 0.06 | Stabilizing | 0.001 | N | 0.148 | neutral | N | 0.452024597 | None | None | N |
K/R | 0.0816 | likely_benign | 0.0879 | benign | -0.109 | Destabilizing | None | N | 0.243 | neutral | N | 0.453338578 | None | None | N |
K/S | 0.1736 | likely_benign | 0.2036 | benign | -0.316 | Destabilizing | 0.001 | N | 0.203 | neutral | None | None | None | None | N |
K/T | 0.0743 | likely_benign | 0.0881 | benign | -0.112 | Destabilizing | None | N | 0.211 | neutral | N | 0.454070441 | None | None | N |
K/V | 0.2006 | likely_benign | 0.2276 | benign | 0.358 | Stabilizing | 0.038 | N | 0.367 | neutral | None | None | None | None | N |
K/W | 0.5932 | likely_pathogenic | 0.6326 | pathogenic | -0.054 | Destabilizing | 0.864 | D | 0.342 | neutral | None | None | None | None | N |
K/Y | 0.3734 | ambiguous | 0.4057 | ambiguous | 0.26 | Stabilizing | 0.356 | N | 0.316 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.