Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4669 | 14230;14231;14232 | chr2:178739228;178739227;178739226 | chr2:179603955;179603954;179603953 |
N2AB | 4352 | 13279;13280;13281 | chr2:178739228;178739227;178739226 | chr2:179603955;179603954;179603953 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4306 | 13141;13142;13143 | chr2:178739228;178739227;178739226 | chr2:179603955;179603954;179603953 |
Novex-1 | 4431 | 13516;13517;13518 | chr2:178739228;178739227;178739226 | chr2:179603955;179603954;179603953 |
Novex-2 | 4498 | 13717;13718;13719 | chr2:178739228;178739227;178739226 | chr2:179603955;179603954;179603953 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.698 | D | 0.517 | 0.279 | 0.307966526162 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs368543748 | 0.451 | 0.075 | N | 0.297 | 0.201 | 0.261217442401 | gnomAD-2.1.1 | 7.44E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.93651E-04 | None | 0 | None | 0 | 2.87E-05 | 0 |
E/K | rs368543748 | 0.451 | 0.075 | N | 0.297 | 0.201 | 0.261217442401 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 5.78481E-04 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs368543748 | 0.451 | 0.075 | N | 0.297 | 0.201 | 0.261217442401 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/K | rs368543748 | 0.451 | 0.075 | N | 0.297 | 0.201 | 0.261217442401 | gnomAD-4.0.0 | 3.67032E-05 | None | None | None | None | N | None | 1.34405E-05 | 0 | None | 0 | 4.7357E-04 | None | 0 | 0 | 2.75838E-05 | 1.17523E-05 | 4.91819E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1117 | likely_benign | 0.1101 | benign | -0.03 | Destabilizing | 0.698 | D | 0.525 | neutral | N | 0.483739863 | None | None | N |
E/C | 0.7154 | likely_pathogenic | 0.7155 | pathogenic | 0.149 | Stabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/D | 0.127 | likely_benign | 0.1281 | benign | -0.137 | Destabilizing | 0.014 | N | 0.226 | neutral | N | 0.470275751 | None | None | N |
E/F | 0.5948 | likely_pathogenic | 0.6021 | pathogenic | -0.187 | Destabilizing | 0.993 | D | 0.632 | neutral | None | None | None | None | N |
E/G | 0.1147 | likely_benign | 0.1182 | benign | -0.141 | Destabilizing | 0.698 | D | 0.517 | neutral | D | 0.543899119 | None | None | N |
E/H | 0.3331 | likely_benign | 0.3242 | benign | 0.237 | Stabilizing | 0.978 | D | 0.478 | neutral | None | None | None | None | N |
E/I | 0.2596 | likely_benign | 0.2538 | benign | 0.201 | Stabilizing | 0.978 | D | 0.627 | neutral | None | None | None | None | N |
E/K | 0.0805 | likely_benign | 0.0777 | benign | 0.573 | Stabilizing | 0.075 | N | 0.297 | neutral | N | 0.503101119 | None | None | N |
E/L | 0.2914 | likely_benign | 0.2847 | benign | 0.201 | Stabilizing | 0.956 | D | 0.567 | neutral | None | None | None | None | N |
E/M | 0.317 | likely_benign | 0.3177 | benign | 0.182 | Stabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
E/N | 0.1957 | likely_benign | 0.1969 | benign | 0.479 | Stabilizing | 0.043 | N | 0.285 | neutral | None | None | None | None | N |
E/P | 0.5067 | ambiguous | 0.5393 | ambiguous | 0.142 | Stabilizing | 0.978 | D | 0.523 | neutral | None | None | None | None | N |
E/Q | 0.1211 | likely_benign | 0.115 | benign | 0.466 | Stabilizing | 0.922 | D | 0.475 | neutral | N | 0.496354177 | None | None | N |
E/R | 0.1403 | likely_benign | 0.1384 | benign | 0.672 | Stabilizing | 0.915 | D | 0.475 | neutral | None | None | None | None | N |
E/S | 0.1501 | likely_benign | 0.1513 | benign | 0.305 | Stabilizing | 0.754 | D | 0.504 | neutral | None | None | None | None | N |
E/T | 0.152 | likely_benign | 0.15 | benign | 0.397 | Stabilizing | 0.86 | D | 0.498 | neutral | None | None | None | None | N |
E/V | 0.1527 | likely_benign | 0.1511 | benign | 0.142 | Stabilizing | 0.942 | D | 0.537 | neutral | D | 0.619441517 | None | None | N |
E/W | 0.7297 | likely_pathogenic | 0.7381 | pathogenic | -0.168 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Y | 0.4868 | ambiguous | 0.4904 | ambiguous | 0.037 | Stabilizing | 0.993 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.