Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4674 | 14245;14246;14247 | chr2:178739213;178739212;178739211 | chr2:179603940;179603939;179603938 |
N2AB | 4357 | 13294;13295;13296 | chr2:178739213;178739212;178739211 | chr2:179603940;179603939;179603938 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4311 | 13156;13157;13158 | chr2:178739213;178739212;178739211 | chr2:179603940;179603939;179603938 |
Novex-1 | 4436 | 13531;13532;13533 | chr2:178739213;178739212;178739211 | chr2:179603940;179603939;179603938 |
Novex-2 | 4503 | 13732;13733;13734 | chr2:178739213;178739212;178739211 | chr2:179603940;179603939;179603938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs761849101 | -0.797 | 0.001 | D | 0.313 | 0.181 | None | gnomAD-2.1.1 | 4.66E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.77E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs761849101 | -0.797 | 0.001 | D | 0.313 | 0.181 | None | gnomAD-4.0.0 | 7.09787E-07 | None | None | None | None | N | None | 3.09809E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1196320491 | -0.553 | 0.002 | D | 0.325 | 0.144 | None | gnomAD-2.1.1 | 4.59E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 5.21E-05 | 0 | 0 |
E/Q | rs1196320491 | -0.553 | 0.002 | D | 0.325 | 0.144 | None | gnomAD-4.0.0 | 1.72318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.95351E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1176 | likely_benign | 0.0991 | benign | -1.059 | Destabilizing | 0.001 | N | 0.389 | neutral | D | 0.55875195 | None | None | N |
E/C | 0.6941 | likely_pathogenic | 0.6742 | pathogenic | -0.473 | Destabilizing | 0.909 | D | 0.745 | deleterious | None | None | None | None | N |
E/D | 0.1036 | likely_benign | 0.1187 | benign | -0.954 | Destabilizing | 0.001 | N | 0.313 | neutral | D | 0.591898832 | None | None | N |
E/F | 0.4729 | ambiguous | 0.4518 | ambiguous | -0.284 | Destabilizing | 0.726 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.146 | likely_benign | 0.146 | benign | -1.44 | Destabilizing | 0.124 | N | 0.628 | neutral | D | 0.70339072 | None | None | N |
E/H | 0.3009 | likely_benign | 0.2925 | benign | -0.408 | Destabilizing | 0.567 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.1864 | likely_benign | 0.1683 | benign | -0.008 | Destabilizing | 0.567 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.0926 | likely_benign | 0.0887 | benign | -0.388 | Destabilizing | 0.124 | N | 0.576 | neutral | N | 0.499551229 | None | None | N |
E/L | 0.225 | likely_benign | 0.2038 | benign | -0.008 | Destabilizing | 0.396 | N | 0.683 | prob.neutral | None | None | None | None | N |
E/M | 0.2598 | likely_benign | 0.231 | benign | 0.462 | Stabilizing | 0.909 | D | 0.742 | deleterious | None | None | None | None | N |
E/N | 0.1423 | likely_benign | 0.1477 | benign | -1.033 | Destabilizing | 0.396 | N | 0.595 | neutral | None | None | None | None | N |
E/P | 0.5252 | ambiguous | 0.4856 | ambiguous | -0.339 | Destabilizing | 0.567 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Q | 0.1117 | likely_benign | 0.1029 | benign | -0.891 | Destabilizing | 0.002 | N | 0.325 | neutral | D | 0.533919147 | None | None | N |
E/R | 0.161 | likely_benign | 0.1522 | benign | -0.072 | Destabilizing | 0.396 | N | 0.605 | neutral | None | None | None | None | N |
E/S | 0.139 | likely_benign | 0.1301 | benign | -1.369 | Destabilizing | 0.157 | N | 0.567 | neutral | None | None | None | None | N |
E/T | 0.133 | likely_benign | 0.1147 | benign | -1.032 | Destabilizing | 0.157 | N | 0.627 | neutral | None | None | None | None | N |
E/V | 0.1378 | likely_benign | 0.126 | benign | -0.339 | Destabilizing | 0.331 | N | 0.68 | prob.neutral | N | 0.510046502 | None | None | N |
E/W | 0.7097 | likely_pathogenic | 0.7046 | pathogenic | 0.118 | Stabilizing | 0.968 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.3782 | ambiguous | 0.3654 | ambiguous | 0.037 | Stabilizing | 0.726 | D | 0.75 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.