Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4680 | 14263;14264;14265 | chr2:178739195;178739194;178739193 | chr2:179603922;179603921;179603920 |
N2AB | 4363 | 13312;13313;13314 | chr2:178739195;178739194;178739193 | chr2:179603922;179603921;179603920 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4317 | 13174;13175;13176 | chr2:178739195;178739194;178739193 | chr2:179603922;179603921;179603920 |
Novex-1 | 4442 | 13549;13550;13551 | chr2:178739195;178739194;178739193 | chr2:179603922;179603921;179603920 |
Novex-2 | 4509 | 13750;13751;13752 | chr2:178739195;178739194;178739193 | chr2:179603922;179603921;179603920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | None | N | 0.291 | 0.09 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1046 | likely_benign | 0.1199 | benign | -2.047 | Highly Destabilizing | 0.007 | N | 0.331 | neutral | None | None | None | None | N |
L/C | 0.242 | likely_benign | 0.2514 | benign | -1.37 | Destabilizing | 0.676 | D | 0.447 | neutral | None | None | None | None | N |
L/D | 0.3725 | ambiguous | 0.4168 | ambiguous | -2.412 | Highly Destabilizing | 0.038 | N | 0.473 | neutral | None | None | None | None | N |
L/E | 0.1461 | likely_benign | 0.1554 | benign | -2.384 | Highly Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
L/F | 0.0831 | likely_benign | 0.0837 | benign | -1.489 | Destabilizing | 0.171 | N | 0.385 | neutral | N | 0.481910722 | None | None | N |
L/G | 0.2386 | likely_benign | 0.2834 | benign | -2.395 | Highly Destabilizing | 0.038 | N | 0.468 | neutral | None | None | None | None | N |
L/H | 0.0995 | likely_benign | 0.1022 | benign | -1.644 | Destabilizing | 0.214 | N | 0.49 | neutral | None | None | None | None | N |
L/I | 0.0716 | likely_benign | 0.0723 | benign | -1.126 | Destabilizing | None | N | 0.101 | neutral | None | None | None | None | N |
L/K | 0.1022 | likely_benign | 0.1025 | benign | -1.425 | Destabilizing | 0.016 | N | 0.435 | neutral | None | None | None | None | N |
L/M | 0.0796 | likely_benign | 0.0809 | benign | -0.889 | Destabilizing | 0.171 | N | 0.414 | neutral | N | 0.504000445 | None | None | N |
L/N | 0.1747 | likely_benign | 0.1928 | benign | -1.376 | Destabilizing | 0.038 | N | 0.539 | neutral | None | None | None | None | N |
L/P | 0.7644 | likely_pathogenic | 0.821 | pathogenic | -1.407 | Destabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | N |
L/Q | 0.0725 | likely_benign | 0.0738 | benign | -1.588 | Destabilizing | 0.001 | N | 0.359 | neutral | None | None | None | None | N |
L/R | 0.091 | likely_benign | 0.0935 | benign | -0.807 | Destabilizing | 0.038 | N | 0.508 | neutral | None | None | None | None | N |
L/S | 0.076 | likely_benign | 0.0893 | benign | -1.908 | Destabilizing | None | N | 0.291 | neutral | N | 0.393865624 | None | None | N |
L/T | 0.081 | likely_benign | 0.0911 | benign | -1.775 | Destabilizing | 0.016 | N | 0.389 | neutral | None | None | None | None | N |
L/V | 0.0663 | likely_benign | 0.0676 | benign | -1.407 | Destabilizing | None | N | 0.105 | neutral | N | 0.412876673 | None | None | N |
L/W | 0.0925 | likely_benign | 0.1029 | benign | -1.657 | Destabilizing | 0.828 | D | 0.485 | neutral | N | 0.498572199 | None | None | N |
L/Y | 0.1685 | likely_benign | 0.1803 | benign | -1.432 | Destabilizing | 0.356 | N | 0.466 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.