Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4682 | 14269;14270;14271 | chr2:178739189;178739188;178739187 | chr2:179603916;179603915;179603914 |
N2AB | 4365 | 13318;13319;13320 | chr2:178739189;178739188;178739187 | chr2:179603916;179603915;179603914 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4319 | 13180;13181;13182 | chr2:178739189;178739188;178739187 | chr2:179603916;179603915;179603914 |
Novex-1 | 4444 | 13555;13556;13557 | chr2:178739189;178739188;178739187 | chr2:179603916;179603915;179603914 |
Novex-2 | 4511 | 13756;13757;13758 | chr2:178739189;178739188;178739187 | chr2:179603916;179603915;179603914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs2082045865 | None | None | N | 0.147 | 0.155 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs2082045865 | None | None | N | 0.147 | 0.155 | None | gnomAD-4.0.0 | 2.91265E-06 | None | None | None | None | N | None | 1.78171E-05 | 0 | None | 0 | 2.48373E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.117 | likely_benign | 0.115 | benign | 0.059 | Stabilizing | None | N | 0.143 | neutral | N | 0.489508503 | None | None | N |
D/C | 0.4189 | ambiguous | 0.4085 | ambiguous | 0.066 | Stabilizing | 0.676 | D | 0.209 | neutral | None | None | None | None | N |
D/E | 0.1295 | likely_benign | 0.1285 | benign | -0.26 | Destabilizing | None | N | 0.135 | neutral | N | 0.439011221 | None | None | N |
D/F | 0.4019 | ambiguous | 0.4009 | ambiguous | -0.144 | Destabilizing | None | N | 0.251 | neutral | None | None | None | None | N |
D/G | 0.1062 | likely_benign | 0.1119 | benign | -0.031 | Destabilizing | None | N | 0.147 | neutral | N | 0.497144159 | None | None | N |
D/H | 0.164 | likely_benign | 0.1603 | benign | 0.366 | Stabilizing | 0.295 | N | 0.271 | neutral | D | 0.607985997 | None | None | N |
D/I | 0.2175 | likely_benign | 0.2149 | benign | 0.224 | Stabilizing | 0.072 | N | 0.249 | neutral | None | None | None | None | N |
D/K | 0.1672 | likely_benign | 0.169 | benign | 0.512 | Stabilizing | 0.016 | N | 0.247 | neutral | None | None | None | None | N |
D/L | 0.2531 | likely_benign | 0.2534 | benign | 0.224 | Stabilizing | 0.016 | N | 0.229 | neutral | None | None | None | None | N |
D/M | 0.4602 | ambiguous | 0.4699 | ambiguous | 0.139 | Stabilizing | 0.356 | N | 0.219 | neutral | None | None | None | None | N |
D/N | 0.0915 | likely_benign | 0.0935 | benign | 0.407 | Stabilizing | 0.055 | N | 0.278 | neutral | N | 0.504674529 | None | None | N |
D/P | 0.4787 | ambiguous | 0.4706 | ambiguous | 0.187 | Stabilizing | 0.072 | N | 0.324 | neutral | None | None | None | None | N |
D/Q | 0.1983 | likely_benign | 0.2007 | benign | 0.386 | Stabilizing | 0.001 | N | 0.226 | neutral | None | None | None | None | N |
D/R | 0.1883 | likely_benign | 0.1908 | benign | 0.635 | Stabilizing | 0.038 | N | 0.309 | neutral | None | None | None | None | N |
D/S | 0.0947 | likely_benign | 0.0995 | benign | 0.294 | Stabilizing | 0.016 | N | 0.22 | neutral | None | None | None | None | N |
D/T | 0.1616 | likely_benign | 0.1633 | benign | 0.367 | Stabilizing | 0.016 | N | 0.262 | neutral | None | None | None | None | N |
D/V | 0.1441 | likely_benign | 0.1386 | benign | 0.187 | Stabilizing | 0.029 | N | 0.265 | neutral | N | 0.511143612 | None | None | N |
D/W | 0.7448 | likely_pathogenic | 0.7406 | pathogenic | -0.144 | Destabilizing | 0.864 | D | 0.215 | neutral | None | None | None | None | N |
D/Y | 0.1596 | likely_benign | 0.1501 | benign | 0.072 | Stabilizing | 0.093 | N | 0.276 | neutral | N | 0.507405094 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.