Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4689 | 14290;14291;14292 | chr2:178739168;178739167;178739166 | chr2:179603895;179603894;179603893 |
N2AB | 4372 | 13339;13340;13341 | chr2:178739168;178739167;178739166 | chr2:179603895;179603894;179603893 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4326 | 13201;13202;13203 | chr2:178739168;178739167;178739166 | chr2:179603895;179603894;179603893 |
Novex-1 | 4451 | 13576;13577;13578 | chr2:178739168;178739167;178739166 | chr2:179603895;179603894;179603893 |
Novex-2 | 4518 | 13777;13778;13779 | chr2:178739168;178739167;178739166 | chr2:179603895;179603894;179603893 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs772266620 | 0.169 | 0.811 | D | 0.716 | 0.533 | None | gnomAD-2.1.1 | 1.13E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.30412E-04 | None | 0 | None | 0 | 0 | 0 |
S/L | rs772266620 | 0.169 | 0.811 | D | 0.716 | 0.533 | None | gnomAD-4.0.0 | 5.66341E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 8.56018E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0714 | likely_benign | 0.0751 | benign | -0.496 | Destabilizing | 0.026 | N | 0.347 | neutral | D | 0.597583124 | None | None | I |
S/C | 0.134 | likely_benign | 0.1338 | benign | -0.349 | Destabilizing | 0.997 | D | 0.712 | prob.delet. | None | None | None | None | I |
S/D | 0.4255 | ambiguous | 0.5172 | ambiguous | -0.214 | Destabilizing | 0.919 | D | 0.556 | neutral | None | None | None | None | I |
S/E | 0.4225 | ambiguous | 0.5016 | ambiguous | -0.286 | Destabilizing | 0.919 | D | 0.564 | neutral | None | None | None | None | I |
S/F | 0.1587 | likely_benign | 0.17 | benign | -0.923 | Destabilizing | 0.988 | D | 0.8 | deleterious | None | None | None | None | I |
S/G | 0.1198 | likely_benign | 0.1346 | benign | -0.656 | Destabilizing | 0.851 | D | 0.579 | neutral | None | None | None | None | I |
S/H | 0.2671 | likely_benign | 0.2938 | benign | -1.216 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/I | 0.2049 | likely_benign | 0.2232 | benign | -0.192 | Destabilizing | 0.976 | D | 0.781 | deleterious | None | None | None | None | I |
S/K | 0.4133 | ambiguous | 0.4594 | ambiguous | -0.658 | Destabilizing | 0.919 | D | 0.561 | neutral | None | None | None | None | I |
S/L | 0.1037 | likely_benign | 0.1078 | benign | -0.192 | Destabilizing | 0.811 | D | 0.716 | prob.delet. | D | 0.648063118 | None | None | I |
S/M | 0.2218 | likely_benign | 0.2341 | benign | 0.164 | Stabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
S/N | 0.1908 | likely_benign | 0.2163 | benign | -0.417 | Destabilizing | 0.919 | D | 0.583 | neutral | None | None | None | None | I |
S/P | 0.5493 | ambiguous | 0.5916 | pathogenic | -0.263 | Destabilizing | 0.984 | D | 0.739 | prob.delet. | D | 0.63625711 | None | None | I |
S/Q | 0.4045 | ambiguous | 0.4511 | ambiguous | -0.712 | Destabilizing | 0.988 | D | 0.6 | neutral | None | None | None | None | I |
S/R | 0.3355 | likely_benign | 0.3742 | ambiguous | -0.426 | Destabilizing | 0.976 | D | 0.749 | deleterious | None | None | None | None | I |
S/T | 0.0787 | likely_benign | 0.0808 | benign | -0.496 | Destabilizing | 0.011 | N | 0.299 | neutral | N | 0.502467075 | None | None | I |
S/V | 0.1782 | likely_benign | 0.1881 | benign | -0.263 | Destabilizing | 0.851 | D | 0.735 | prob.delet. | None | None | None | None | I |
S/W | 0.3157 | likely_benign | 0.3377 | benign | -0.889 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
S/Y | 0.1476 | likely_benign | 0.1551 | benign | -0.634 | Destabilizing | 0.996 | D | 0.804 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.