Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4693 | 14302;14303;14304 | chr2:178739156;178739155;178739154 | chr2:179603883;179603882;179603881 |
N2AB | 4376 | 13351;13352;13353 | chr2:178739156;178739155;178739154 | chr2:179603883;179603882;179603881 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4330 | 13213;13214;13215 | chr2:178739156;178739155;178739154 | chr2:179603883;179603882;179603881 |
Novex-1 | 4455 | 13588;13589;13590 | chr2:178739156;178739155;178739154 | chr2:179603883;179603882;179603881 |
Novex-2 | 4522 | 13789;13790;13791 | chr2:178739156;178739155;178739154 | chr2:179603883;179603882;179603881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.992 | D | 0.464 | 0.363 | None | gnomAD-4.0.0 | 7.35882E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.4021E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1248 | likely_benign | 0.1337 | benign | -0.833 | Destabilizing | 0.992 | D | 0.485 | neutral | D | 0.584151158 | None | None | N |
T/C | 0.512 | ambiguous | 0.5193 | ambiguous | -0.602 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/D | 0.4092 | ambiguous | 0.433 | ambiguous | -0.286 | Destabilizing | 0.996 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/E | 0.3085 | likely_benign | 0.3216 | benign | -0.275 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
T/F | 0.2503 | likely_benign | 0.2527 | benign | -0.794 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/G | 0.3928 | ambiguous | 0.4336 | ambiguous | -1.103 | Destabilizing | 0.994 | D | 0.658 | neutral | None | None | None | None | N |
T/H | 0.2254 | likely_benign | 0.2174 | benign | -1.339 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
T/I | 0.1874 | likely_benign | 0.1923 | benign | -0.2 | Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.556181869 | None | None | N |
T/K | 0.2035 | likely_benign | 0.205 | benign | -0.762 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/L | 0.1308 | likely_benign | 0.1376 | benign | -0.2 | Destabilizing | 0.997 | D | 0.621 | neutral | None | None | None | None | N |
T/M | 0.1126 | likely_benign | 0.114 | benign | 0.033 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
T/N | 0.1514 | likely_benign | 0.1594 | benign | -0.709 | Destabilizing | 0.467 | N | 0.304 | neutral | D | 0.586331613 | None | None | N |
T/P | 0.5786 | likely_pathogenic | 0.6675 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.714516039 | None | None | N |
T/Q | 0.2381 | likely_benign | 0.2357 | benign | -0.887 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
T/R | 0.153 | likely_benign | 0.1513 | benign | -0.534 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
T/S | 0.1403 | likely_benign | 0.1496 | benign | -1.015 | Destabilizing | 0.992 | D | 0.464 | neutral | D | 0.54630057 | None | None | N |
T/V | 0.175 | likely_benign | 0.181 | benign | -0.379 | Destabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | N |
T/W | 0.5739 | likely_pathogenic | 0.5784 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/Y | 0.2855 | likely_benign | 0.288 | benign | -0.479 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.