Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4694 | 14305;14306;14307 | chr2:178739153;178739152;178739151 | chr2:179603880;179603879;179603878 |
N2AB | 4377 | 13354;13355;13356 | chr2:178739153;178739152;178739151 | chr2:179603880;179603879;179603878 |
N2A | None | None | chr2:None | chr2:None |
N2B | 4331 | 13216;13217;13218 | chr2:178739153;178739152;178739151 | chr2:179603880;179603879;179603878 |
Novex-1 | 4456 | 13591;13592;13593 | chr2:178739153;178739152;178739151 | chr2:179603880;179603879;179603878 |
Novex-2 | 4523 | 13792;13793;13794 | chr2:178739153;178739152;178739151 | chr2:179603880;179603879;179603878 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2082041686 | None | 0.006 | D | 0.479 | 0.263 | None | gnomAD-4.0.0 | 2.94405E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.82103E-06 | 1.49584E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4927 | ambiguous | 0.5591 | ambiguous | -1.877 | Destabilizing | 0.645 | D | 0.6 | neutral | D | 0.728142342 | None | None | N |
V/C | 0.9335 | likely_pathogenic | 0.9498 | pathogenic | -1.698 | Destabilizing | 0.995 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/D | 0.9713 | likely_pathogenic | 0.9832 | pathogenic | -2.52 | Highly Destabilizing | 0.945 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/E | 0.9306 | likely_pathogenic | 0.9507 | pathogenic | -2.472 | Highly Destabilizing | 0.928 | D | 0.683 | prob.neutral | D | 0.764651692 | None | None | N |
V/F | 0.6348 | likely_pathogenic | 0.7464 | pathogenic | -1.366 | Destabilizing | 0.894 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/G | 0.7505 | likely_pathogenic | 0.8216 | pathogenic | -2.215 | Highly Destabilizing | 0.928 | D | 0.683 | prob.neutral | D | 0.764651692 | None | None | N |
V/H | 0.9765 | likely_pathogenic | 0.9849 | pathogenic | -1.59 | Destabilizing | 0.995 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/I | 0.0948 | likely_benign | 0.0934 | benign | -1.008 | Destabilizing | 0.006 | N | 0.479 | neutral | D | 0.533453054 | None | None | N |
V/K | 0.9433 | likely_pathogenic | 0.9588 | pathogenic | -1.518 | Destabilizing | 0.945 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/L | 0.4957 | ambiguous | 0.5613 | ambiguous | -1.008 | Destabilizing | 0.114 | N | 0.623 | neutral | D | 0.681596749 | None | None | N |
V/M | 0.4197 | ambiguous | 0.499 | ambiguous | -1.073 | Destabilizing | 0.894 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/N | 0.9192 | likely_pathogenic | 0.9476 | pathogenic | -1.552 | Destabilizing | 0.981 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/P | 0.9236 | likely_pathogenic | 0.9454 | pathogenic | -1.268 | Destabilizing | 0.981 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/Q | 0.9438 | likely_pathogenic | 0.9596 | pathogenic | -1.734 | Destabilizing | 0.981 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/R | 0.9156 | likely_pathogenic | 0.9381 | pathogenic | -1.0 | Destabilizing | 0.945 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.7644 | likely_pathogenic | 0.8267 | pathogenic | -2.042 | Highly Destabilizing | 0.945 | D | 0.653 | neutral | None | None | None | None | N |
V/T | 0.5111 | ambiguous | 0.5722 | pathogenic | -1.892 | Destabilizing | 0.707 | D | 0.669 | neutral | None | None | None | None | N |
V/W | 0.9853 | likely_pathogenic | 0.9907 | pathogenic | -1.573 | Destabilizing | 0.995 | D | 0.667 | neutral | None | None | None | None | N |
V/Y | 0.9544 | likely_pathogenic | 0.9714 | pathogenic | -1.29 | Destabilizing | 0.945 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.