Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4703 | 14332;14333;14334 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
N2AB | 4386 | 13381;13382;13383 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
N2A | 3459 | 10600;10601;10602 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
N2B | 4340 | 13243;13244;13245 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
Novex-1 | 4465 | 13618;13619;13620 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
Novex-2 | 4532 | 13819;13820;13821 | chr2:178738346;178738345;178738344 | chr2:179603073;179603072;179603071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1479181903 | 0.064 | 0.117 | N | 0.318 | 0.133 | 0.12205267543 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/Q | rs1479181903 | 0.064 | 0.117 | N | 0.318 | 0.133 | 0.12205267543 | gnomAD-4.0.0 | 1.59553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86763E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3736 | ambiguous | 0.4257 | ambiguous | -0.231 | Destabilizing | 0.067 | N | 0.321 | neutral | None | None | None | None | N |
K/C | 0.65 | likely_pathogenic | 0.7099 | pathogenic | -0.479 | Destabilizing | 0.935 | D | 0.314 | neutral | None | None | None | None | N |
K/D | 0.7243 | likely_pathogenic | 0.7562 | pathogenic | -0.098 | Destabilizing | 0.149 | N | 0.368 | neutral | None | None | None | None | N |
K/E | 0.21 | likely_benign | 0.2399 | benign | -0.02 | Destabilizing | 0.027 | N | 0.271 | neutral | N | 0.436051124 | None | None | N |
K/F | 0.7385 | likely_pathogenic | 0.7745 | pathogenic | 0.016 | Stabilizing | 0.555 | D | 0.363 | neutral | None | None | None | None | N |
K/G | 0.4266 | ambiguous | 0.4784 | ambiguous | -0.55 | Destabilizing | 0.149 | N | 0.36 | neutral | None | None | None | None | N |
K/H | 0.3207 | likely_benign | 0.3468 | ambiguous | -0.784 | Destabilizing | 0.555 | D | 0.273 | neutral | None | None | None | None | N |
K/I | 0.2851 | likely_benign | 0.3315 | benign | 0.567 | Stabilizing | 0.002 | N | 0.241 | neutral | None | None | None | None | N |
K/L | 0.2949 | likely_benign | 0.3309 | benign | 0.567 | Stabilizing | 0.035 | N | 0.317 | neutral | None | None | None | None | N |
K/M | 0.2405 | likely_benign | 0.2647 | benign | 0.223 | Stabilizing | 0.484 | N | 0.274 | neutral | N | 0.443554199 | None | None | N |
K/N | 0.5032 | ambiguous | 0.5365 | ambiguous | -0.357 | Destabilizing | 0.117 | N | 0.258 | neutral | N | 0.450160553 | None | None | N |
K/P | 0.8634 | likely_pathogenic | 0.8761 | pathogenic | 0.331 | Stabilizing | 0.555 | D | 0.365 | neutral | None | None | None | None | N |
K/Q | 0.123 | likely_benign | 0.1397 | benign | -0.424 | Destabilizing | 0.117 | N | 0.318 | neutral | N | 0.444937374 | None | None | N |
K/R | 0.0648 | likely_benign | 0.0701 | benign | -0.494 | Destabilizing | None | N | 0.084 | neutral | N | 0.377019657 | None | None | N |
K/S | 0.4441 | ambiguous | 0.4884 | ambiguous | -0.879 | Destabilizing | 0.149 | N | 0.237 | neutral | None | None | None | None | N |
K/T | 0.1772 | likely_benign | 0.1962 | benign | -0.621 | Destabilizing | 0.117 | N | 0.356 | neutral | N | 0.399809287 | None | None | N |
K/V | 0.2837 | likely_benign | 0.3247 | benign | 0.331 | Stabilizing | 0.035 | N | 0.315 | neutral | None | None | None | None | N |
K/W | 0.6429 | likely_pathogenic | 0.6991 | pathogenic | 0.067 | Stabilizing | 0.935 | D | 0.354 | neutral | None | None | None | None | N |
K/Y | 0.6103 | likely_pathogenic | 0.6537 | pathogenic | 0.349 | Stabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.