Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4707 | 14344;14345;14346 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
N2AB | 4390 | 13393;13394;13395 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
N2A | 3463 | 10612;10613;10614 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
N2B | 4344 | 13255;13256;13257 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
Novex-1 | 4469 | 13630;13631;13632 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
Novex-2 | 4536 | 13831;13832;13833 | chr2:178738334;178738333;178738332 | chr2:179603061;179603060;179603059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs749584249 | 0.597 | 0.935 | N | 0.347 | 0.174 | 0.275641507738 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | I | None | 0 | 0 | None | 9.71E-05 | 0 | None | 0 | None | 0 | 3.92E-05 | 0 |
E/K | rs749584249 | 0.597 | 0.935 | N | 0.347 | 0.174 | 0.275641507738 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 0 | 1.31096E-04 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/K | rs749584249 | 0.597 | 0.935 | N | 0.347 | 0.174 | 0.275641507738 | gnomAD-4.0.0 | 1.67438E-05 | None | None | None | None | I | None | 0 | 5.00684E-05 | None | 3.38089E-05 | 0 | None | 0 | 1.64636E-04 | 1.69619E-05 | 0 | 3.20523E-05 |
E/Q | rs749584249 | 0.281 | 0.336 | N | 0.225 | 0.108 | 0.235038932564 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.56E-05 | None | 0 | 0 | 0 |
E/Q | rs749584249 | 0.281 | 0.336 | N | 0.225 | 0.108 | 0.235038932564 | gnomAD-4.0.0 | 1.36945E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32148E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1517 | likely_benign | 0.1843 | benign | -0.295 | Destabilizing | 0.064 | N | 0.163 | neutral | N | 0.482296626 | None | None | I |
E/C | 0.8724 | likely_pathogenic | 0.9104 | pathogenic | -0.44 | Destabilizing | 0.998 | D | 0.387 | neutral | None | None | None | None | I |
E/D | 0.2092 | likely_benign | 0.2453 | benign | -0.449 | Destabilizing | 0.016 | N | 0.173 | neutral | N | 0.502657247 | None | None | I |
E/F | 0.7136 | likely_pathogenic | 0.7688 | pathogenic | 0.115 | Stabilizing | 0.98 | D | 0.456 | neutral | None | None | None | None | I |
E/G | 0.1873 | likely_benign | 0.2316 | benign | -0.528 | Destabilizing | 0.837 | D | 0.443 | neutral | N | 0.507447294 | None | None | I |
E/H | 0.4919 | ambiguous | 0.5461 | ambiguous | 0.547 | Stabilizing | 0.98 | D | 0.384 | neutral | None | None | None | None | I |
E/I | 0.3127 | likely_benign | 0.3729 | ambiguous | 0.301 | Stabilizing | 0.083 | N | 0.387 | neutral | None | None | None | None | I |
E/K | 0.143 | likely_benign | 0.1891 | benign | 0.102 | Stabilizing | 0.935 | D | 0.347 | neutral | N | 0.489707053 | None | None | I |
E/L | 0.321 | likely_benign | 0.39 | ambiguous | 0.301 | Stabilizing | 0.584 | D | 0.425 | neutral | None | None | None | None | I |
E/M | 0.4059 | ambiguous | 0.4621 | ambiguous | 0.103 | Stabilizing | 0.98 | D | 0.425 | neutral | None | None | None | None | I |
E/N | 0.3317 | likely_benign | 0.3717 | ambiguous | -0.403 | Destabilizing | 0.872 | D | 0.384 | neutral | None | None | None | None | I |
E/P | 0.6928 | likely_pathogenic | 0.7202 | pathogenic | 0.123 | Stabilizing | 0.932 | D | 0.441 | neutral | None | None | None | None | I |
E/Q | 0.1211 | likely_benign | 0.1341 | benign | -0.312 | Destabilizing | 0.336 | N | 0.225 | neutral | N | 0.448236627 | None | None | I |
E/R | 0.2563 | likely_benign | 0.2924 | benign | 0.524 | Stabilizing | 0.872 | D | 0.367 | neutral | None | None | None | None | I |
E/S | 0.2062 | likely_benign | 0.2364 | benign | -0.57 | Destabilizing | 0.584 | D | 0.321 | neutral | None | None | None | None | I |
E/T | 0.2181 | likely_benign | 0.2606 | benign | -0.366 | Destabilizing | 0.083 | N | 0.186 | neutral | None | None | None | None | I |
E/V | 0.1848 | likely_benign | 0.2279 | benign | 0.123 | Stabilizing | 0.514 | D | 0.395 | neutral | N | 0.500750526 | None | None | I |
E/W | 0.9159 | likely_pathogenic | 0.9396 | pathogenic | 0.312 | Stabilizing | 0.998 | D | 0.402 | neutral | None | None | None | None | I |
E/Y | 0.6383 | likely_pathogenic | 0.7047 | pathogenic | 0.366 | Stabilizing | 0.993 | D | 0.459 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.