Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4709 | 14350;14351;14352 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
N2AB | 4392 | 13399;13400;13401 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
N2A | 3465 | 10618;10619;10620 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
N2B | 4346 | 13261;13262;13263 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
Novex-1 | 4471 | 13636;13637;13638 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
Novex-2 | 4538 | 13837;13838;13839 | chr2:178738328;178738327;178738326 | chr2:179603055;179603054;179603053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs756566095 | -1.035 | 0.971 | D | 0.72 | 0.548 | 0.731923157262 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
L/P | rs756566095 | -1.035 | 0.971 | D | 0.72 | 0.548 | 0.731923157262 | gnomAD-4.0.0 | 1.59303E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78149E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2033 | likely_benign | 0.2637 | benign | -1.474 | Destabilizing | 0.754 | D | 0.44 | neutral | None | None | None | None | I |
L/C | 0.5672 | likely_pathogenic | 0.6248 | pathogenic | -0.909 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
L/D | 0.8175 | likely_pathogenic | 0.8693 | pathogenic | -0.392 | Destabilizing | 0.956 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/E | 0.2663 | likely_benign | 0.3527 | ambiguous | -0.325 | Destabilizing | 0.754 | D | 0.624 | neutral | None | None | None | None | I |
L/F | 0.2419 | likely_benign | 0.2657 | benign | -0.818 | Destabilizing | 0.993 | D | 0.56 | neutral | None | None | None | None | I |
L/G | 0.6314 | likely_pathogenic | 0.7431 | pathogenic | -1.855 | Destabilizing | 0.956 | D | 0.699 | prob.neutral | None | None | None | None | I |
L/H | 0.3136 | likely_benign | 0.3741 | ambiguous | -1.084 | Destabilizing | 0.994 | D | 0.698 | prob.neutral | None | None | None | None | I |
L/I | 0.0875 | likely_benign | 0.085 | benign | -0.485 | Destabilizing | 0.926 | D | 0.406 | neutral | None | None | None | None | I |
L/K | 0.225 | likely_benign | 0.2733 | benign | -0.816 | Destabilizing | 0.915 | D | 0.585 | neutral | None | None | None | None | I |
L/M | 0.0986 | likely_benign | 0.1064 | benign | -0.501 | Destabilizing | 0.971 | D | 0.581 | neutral | N | 0.50672811 | None | None | I |
L/N | 0.5502 | ambiguous | 0.623 | pathogenic | -0.721 | Destabilizing | 0.956 | D | 0.718 | prob.delet. | None | None | None | None | I |
L/P | 0.9263 | likely_pathogenic | 0.9523 | pathogenic | -0.784 | Destabilizing | 0.971 | D | 0.72 | prob.delet. | D | 0.545039717 | None | None | I |
L/Q | 0.0938 | likely_benign | 0.1374 | benign | -0.754 | Destabilizing | 0.058 | N | 0.341 | neutral | N | 0.494212521 | None | None | I |
L/R | 0.1759 | likely_benign | 0.2301 | benign | -0.465 | Destabilizing | 0.89 | D | 0.664 | neutral | N | 0.518002921 | None | None | I |
L/S | 0.277 | likely_benign | 0.3684 | ambiguous | -1.466 | Destabilizing | 0.915 | D | 0.585 | neutral | None | None | None | None | I |
L/T | 0.1611 | likely_benign | 0.1968 | benign | -1.265 | Destabilizing | 0.956 | D | 0.597 | neutral | None | None | None | None | I |
L/V | 0.0715 | likely_benign | 0.0749 | benign | -0.784 | Destabilizing | 0.822 | D | 0.353 | neutral | N | 0.458740583 | None | None | I |
L/W | 0.4041 | ambiguous | 0.4631 | ambiguous | -0.929 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/Y | 0.5378 | ambiguous | 0.5695 | pathogenic | -0.66 | Destabilizing | 0.978 | D | 0.657 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.