Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4713 | 14362;14363;14364 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
N2AB | 4396 | 13411;13412;13413 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
N2A | 3469 | 10630;10631;10632 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
N2B | 4350 | 13273;13274;13275 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
Novex-1 | 4475 | 13648;13649;13650 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
Novex-2 | 4542 | 13849;13850;13851 | chr2:178738316;178738315;178738314 | chr2:179603043;179603042;179603041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.989 | N | 0.387 | 0.316 | 0.561446168695 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3867 | ambiguous | 0.3344 | benign | -1.031 | Destabilizing | 0.525 | D | 0.336 | neutral | None | None | None | None | I |
L/C | 0.8249 | likely_pathogenic | 0.7651 | pathogenic | -0.588 | Destabilizing | 0.998 | D | 0.266 | neutral | None | None | None | None | I |
L/D | 0.9389 | likely_pathogenic | 0.9168 | pathogenic | -0.432 | Destabilizing | 0.728 | D | 0.389 | neutral | None | None | None | None | I |
L/E | 0.6249 | likely_pathogenic | 0.5761 | pathogenic | -0.507 | Destabilizing | 0.067 | N | 0.216 | neutral | None | None | None | None | I |
L/F | 0.3591 | ambiguous | 0.3099 | benign | -0.928 | Destabilizing | 0.949 | D | 0.298 | neutral | None | None | None | None | I |
L/G | 0.8241 | likely_pathogenic | 0.7926 | pathogenic | -1.255 | Destabilizing | 0.915 | D | 0.389 | neutral | None | None | None | None | I |
L/H | 0.6022 | likely_pathogenic | 0.5326 | ambiguous | -0.523 | Destabilizing | 0.998 | D | 0.311 | neutral | None | None | None | None | I |
L/I | 0.1417 | likely_benign | 0.1137 | benign | -0.541 | Destabilizing | 0.029 | N | 0.129 | neutral | None | None | None | None | I |
L/K | 0.5172 | ambiguous | 0.5082 | ambiguous | -0.552 | Destabilizing | 0.842 | D | 0.407 | neutral | None | None | None | None | I |
L/M | 0.2063 | likely_benign | 0.1839 | benign | -0.361 | Destabilizing | 0.966 | D | 0.311 | neutral | N | 0.44252616 | None | None | I |
L/N | 0.7804 | likely_pathogenic | 0.7234 | pathogenic | -0.251 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | I |
L/P | 0.6957 | likely_pathogenic | 0.6291 | pathogenic | -0.67 | Destabilizing | 0.989 | D | 0.387 | neutral | N | 0.453027599 | None | None | I |
L/Q | 0.3567 | ambiguous | 0.3387 | benign | -0.504 | Destabilizing | 0.934 | D | 0.362 | neutral | N | 0.454019937 | None | None | I |
L/R | 0.4012 | ambiguous | 0.3881 | ambiguous | 0.057 | Stabilizing | 0.934 | D | 0.36 | neutral | N | 0.452365829 | None | None | I |
L/S | 0.5679 | likely_pathogenic | 0.4769 | ambiguous | -0.776 | Destabilizing | 0.842 | D | 0.37 | neutral | None | None | None | None | I |
L/T | 0.4568 | ambiguous | 0.3513 | ambiguous | -0.74 | Destabilizing | 0.842 | D | 0.307 | neutral | None | None | None | None | I |
L/V | 0.1261 | likely_benign | 0.0999 | benign | -0.67 | Destabilizing | 0.002 | N | 0.063 | neutral | N | 0.389917341 | None | None | I |
L/W | 0.5669 | likely_pathogenic | 0.5152 | ambiguous | -0.937 | Destabilizing | 0.998 | D | 0.366 | neutral | None | None | None | None | I |
L/Y | 0.7183 | likely_pathogenic | 0.683 | pathogenic | -0.697 | Destabilizing | 0.974 | D | 0.302 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.