Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4715 | 14368;14369;14370 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
N2AB | 4398 | 13417;13418;13419 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
N2A | 3471 | 10636;10637;10638 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
N2B | 4352 | 13279;13280;13281 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
Novex-1 | 4477 | 13654;13655;13656 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
Novex-2 | 4544 | 13855;13856;13857 | chr2:178738310;178738309;178738308 | chr2:179603037;179603036;179603035 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs376855980 | 0.984 | 0.969 | N | 0.295 | 0.179 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7855 | likely_pathogenic | 0.7761 | pathogenic | 0.114 | Stabilizing | 0.38 | N | 0.255 | neutral | None | None | None | None | I |
H/C | 0.5872 | likely_pathogenic | 0.5289 | ambiguous | 0.504 | Stabilizing | 0.998 | D | 0.293 | neutral | None | None | None | None | I |
H/D | 0.6461 | likely_pathogenic | 0.5935 | pathogenic | 0.058 | Stabilizing | 0.007 | N | 0.148 | neutral | N | 0.420218994 | None | None | I |
H/E | 0.7389 | likely_pathogenic | 0.7352 | pathogenic | 0.072 | Stabilizing | 0.584 | D | 0.213 | neutral | None | None | None | None | I |
H/F | 0.5898 | likely_pathogenic | 0.6033 | pathogenic | 0.673 | Stabilizing | 0.993 | D | 0.347 | neutral | None | None | None | None | I |
H/G | 0.7608 | likely_pathogenic | 0.7386 | pathogenic | -0.147 | Destabilizing | 0.009 | N | 0.127 | neutral | None | None | None | None | I |
H/I | 0.8018 | likely_pathogenic | 0.8052 | pathogenic | 0.77 | Stabilizing | 0.98 | D | 0.381 | neutral | None | None | None | None | I |
H/K | 0.7323 | likely_pathogenic | 0.7003 | pathogenic | 0.058 | Stabilizing | 0.737 | D | 0.299 | neutral | None | None | None | None | I |
H/L | 0.4225 | ambiguous | 0.4155 | ambiguous | 0.77 | Stabilizing | 0.912 | D | 0.393 | neutral | N | 0.441145034 | None | None | I |
H/M | 0.833 | likely_pathogenic | 0.8332 | pathogenic | 0.604 | Stabilizing | 0.993 | D | 0.3 | neutral | None | None | None | None | I |
H/N | 0.2694 | likely_benign | 0.2591 | benign | 0.102 | Stabilizing | 0.028 | N | 0.129 | neutral | N | 0.405219223 | None | None | I |
H/P | 0.7984 | likely_pathogenic | 0.8365 | pathogenic | 0.577 | Stabilizing | 0.912 | D | 0.38 | neutral | N | 0.430341751 | None | None | I |
H/Q | 0.5426 | ambiguous | 0.5526 | ambiguous | 0.172 | Stabilizing | 0.912 | D | 0.259 | neutral | N | 0.387291005 | None | None | I |
H/R | 0.443 | ambiguous | 0.4153 | ambiguous | -0.381 | Destabilizing | 0.912 | D | 0.215 | neutral | N | 0.433598168 | None | None | I |
H/S | 0.5953 | likely_pathogenic | 0.5754 | pathogenic | 0.108 | Stabilizing | 0.1 | N | 0.131 | neutral | None | None | None | None | I |
H/T | 0.7757 | likely_pathogenic | 0.7566 | pathogenic | 0.218 | Stabilizing | 0.584 | D | 0.309 | neutral | None | None | None | None | I |
H/V | 0.7478 | likely_pathogenic | 0.7518 | pathogenic | 0.577 | Stabilizing | 0.932 | D | 0.376 | neutral | None | None | None | None | I |
H/W | 0.7735 | likely_pathogenic | 0.7609 | pathogenic | 0.677 | Stabilizing | 0.998 | D | 0.299 | neutral | None | None | None | None | I |
H/Y | 0.2345 | likely_benign | 0.2188 | benign | 0.97 | Stabilizing | 0.969 | D | 0.295 | neutral | N | 0.446682385 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.