Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4716 | 14371;14372;14373 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
N2AB | 4399 | 13420;13421;13422 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
N2A | 3472 | 10639;10640;10641 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
N2B | 4353 | 13282;13283;13284 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
Novex-1 | 4478 | 13657;13658;13659 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
Novex-2 | 4545 | 13858;13859;13860 | chr2:178738307;178738306;178738305 | chr2:179603034;179603033;179603032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.002 | N | 0.121 | 0.175 | 0.180583059064 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.247 | likely_benign | 0.2226 | benign | -1.291 | Destabilizing | 0.013 | N | 0.127 | neutral | None | None | None | None | I |
L/C | 0.6883 | likely_pathogenic | 0.6917 | pathogenic | -0.782 | Destabilizing | 0.981 | D | 0.354 | neutral | None | None | None | None | I |
L/D | 0.7777 | likely_pathogenic | 0.7662 | pathogenic | -0.651 | Destabilizing | 0.704 | D | 0.381 | neutral | None | None | None | None | I |
L/E | 0.4336 | ambiguous | 0.4278 | ambiguous | -0.668 | Destabilizing | 0.704 | D | 0.363 | neutral | None | None | None | None | I |
L/F | 0.2257 | likely_benign | 0.2204 | benign | -0.85 | Destabilizing | 0.944 | D | 0.309 | neutral | None | None | None | None | I |
L/G | 0.6069 | likely_pathogenic | 0.5879 | pathogenic | -1.579 | Destabilizing | 0.329 | N | 0.35 | neutral | None | None | None | None | I |
L/H | 0.3101 | likely_benign | 0.2977 | benign | -0.684 | Destabilizing | 0.007 | N | 0.276 | neutral | None | None | None | None | I |
L/I | 0.1364 | likely_benign | 0.1296 | benign | -0.597 | Destabilizing | 0.27 | N | 0.198 | neutral | N | 0.43426484 | None | None | I |
L/K | 0.3297 | likely_benign | 0.3118 | benign | -0.873 | Destabilizing | 0.704 | D | 0.328 | neutral | None | None | None | None | I |
L/M | 0.158 | likely_benign | 0.1481 | benign | -0.497 | Destabilizing | 0.944 | D | 0.335 | neutral | None | None | None | None | I |
L/N | 0.4894 | ambiguous | 0.4708 | ambiguous | -0.701 | Destabilizing | 0.704 | D | 0.382 | neutral | None | None | None | None | I |
L/P | 0.3139 | likely_benign | 0.3153 | benign | -0.796 | Destabilizing | 0.006 | N | 0.279 | neutral | N | 0.346471556 | None | None | I |
L/Q | 0.204 | likely_benign | 0.2093 | benign | -0.878 | Destabilizing | 0.784 | D | 0.419 | neutral | N | 0.430166229 | None | None | I |
L/R | 0.2358 | likely_benign | 0.2329 | benign | -0.254 | Destabilizing | 0.642 | D | 0.38 | neutral | N | 0.393850087 | None | None | I |
L/S | 0.307 | likely_benign | 0.2817 | benign | -1.282 | Destabilizing | 0.013 | N | 0.157 | neutral | None | None | None | None | I |
L/T | 0.2319 | likely_benign | 0.2006 | benign | -1.184 | Destabilizing | 0.329 | N | 0.354 | neutral | None | None | None | None | I |
L/V | 0.1099 | likely_benign | 0.1102 | benign | -0.796 | Destabilizing | 0.002 | N | 0.121 | neutral | N | 0.378177128 | None | None | I |
L/W | 0.3922 | ambiguous | 0.3766 | ambiguous | -0.898 | Destabilizing | 0.995 | D | 0.345 | neutral | None | None | None | None | I |
L/Y | 0.5028 | ambiguous | 0.4825 | ambiguous | -0.681 | Destabilizing | 0.893 | D | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.