Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4717 | 14374;14375;14376 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
N2AB | 4400 | 13423;13424;13425 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
N2A | 3473 | 10642;10643;10644 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
N2B | 4354 | 13285;13286;13287 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
Novex-1 | 4479 | 13660;13661;13662 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
Novex-2 | 4546 | 13861;13862;13863 | chr2:178738304;178738303;178738302 | chr2:179603031;179603030;179603029 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.991 | D | 0.807 | 0.425 | 0.529361283073 | gnomAD-4.0.0 | 6.84348E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.87378E-05 | 0 | 0 | 0 | 0 |
A/V | None | None | 0.322 | N | 0.335 | 0.149 | 0.228597637076 | gnomAD-4.0.0 | 6.84348E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8543 | likely_pathogenic | 0.8967 | pathogenic | -0.705 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
A/D | 0.9955 | likely_pathogenic | 0.9947 | pathogenic | -1.468 | Destabilizing | 0.991 | D | 0.807 | deleterious | D | 0.662703319 | None | None | I |
A/E | 0.9872 | likely_pathogenic | 0.986 | pathogenic | -1.291 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | I |
A/F | 0.9675 | likely_pathogenic | 0.9761 | pathogenic | -0.53 | Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | I |
A/G | 0.3565 | ambiguous | 0.3962 | ambiguous | -1.253 | Destabilizing | 0.046 | N | 0.288 | neutral | N | 0.454879285 | None | None | I |
A/H | 0.9941 | likely_pathogenic | 0.9947 | pathogenic | -1.569 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
A/I | 0.871 | likely_pathogenic | 0.8946 | pathogenic | 0.429 | Stabilizing | 0.973 | D | 0.774 | deleterious | None | None | None | None | I |
A/K | 0.9968 | likely_pathogenic | 0.9961 | pathogenic | -0.977 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | I |
A/L | 0.7882 | likely_pathogenic | 0.8065 | pathogenic | 0.429 | Stabilizing | 0.91 | D | 0.673 | neutral | None | None | None | None | I |
A/M | 0.8982 | likely_pathogenic | 0.9175 | pathogenic | 0.257 | Stabilizing | 0.998 | D | 0.772 | deleterious | None | None | None | None | I |
A/N | 0.9853 | likely_pathogenic | 0.9868 | pathogenic | -1.165 | Destabilizing | 0.986 | D | 0.801 | deleterious | None | None | None | None | I |
A/P | 0.9821 | likely_pathogenic | 0.9817 | pathogenic | 0.069 | Stabilizing | 0.997 | D | 0.8 | deleterious | D | 0.601561893 | None | None | I |
A/Q | 0.9754 | likely_pathogenic | 0.975 | pathogenic | -0.985 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
A/R | 0.9883 | likely_pathogenic | 0.9858 | pathogenic | -1.074 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | I |
A/S | 0.3803 | ambiguous | 0.4327 | ambiguous | -1.637 | Destabilizing | 0.939 | D | 0.575 | neutral | D | 0.584465041 | None | None | I |
A/T | 0.5352 | ambiguous | 0.6277 | pathogenic | -1.313 | Destabilizing | 0.939 | D | 0.616 | neutral | N | 0.485630953 | None | None | I |
A/V | 0.5395 | ambiguous | 0.6197 | pathogenic | 0.069 | Stabilizing | 0.322 | N | 0.335 | neutral | N | 0.426832019 | None | None | I |
A/W | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -1.216 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
A/Y | 0.9916 | likely_pathogenic | 0.9922 | pathogenic | -0.597 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.