Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4718 | 14377;14378;14379 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
N2AB | 4401 | 13426;13427;13428 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
N2A | 3474 | 10645;10646;10647 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
N2B | 4355 | 13288;13289;13290 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
Novex-1 | 4480 | 13663;13664;13665 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
Novex-2 | 4547 | 13864;13865;13866 | chr2:178738301;178738300;178738299 | chr2:179603028;179603027;179603026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs757119133 | 0.42 | 0.946 | N | 0.617 | 0.251 | 0.191931220699 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.69E-05 | 0 |
K/E | rs757119133 | 0.42 | 0.946 | N | 0.617 | 0.251 | 0.191931220699 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
K/E | rs757119133 | 0.42 | 0.946 | N | 0.617 | 0.251 | 0.191931220699 | gnomAD-4.0.0 | 5.14421E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.95084E-05 | 0 | 1.6019E-05 |
K/I | rs753558755 | 0.745 | 0.811 | N | 0.578 | 0.219 | 0.300110245524 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.92773E-04 | None | 0 | None | 0 | 0 | 0 |
K/I | rs753558755 | 0.745 | 0.811 | N | 0.578 | 0.219 | 0.300110245524 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/I | rs753558755 | 0.745 | 0.811 | N | 0.578 | 0.219 | 0.300110245524 | gnomAD-4.0.0 | 5.57814E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.00974E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs753558755 | None | 0.982 | N | 0.615 | 0.174 | 0.231231049324 | gnomAD-4.0.0 | 1.36869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 8.99539E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5398 | ambiguous | 0.6696 | pathogenic | -0.55 | Destabilizing | 0.851 | D | 0.597 | neutral | None | None | None | None | N |
K/C | 0.821 | likely_pathogenic | 0.8602 | pathogenic | -0.631 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/D | 0.859 | likely_pathogenic | 0.9202 | pathogenic | 0.216 | Stabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
K/E | 0.3408 | ambiguous | 0.4634 | ambiguous | 0.314 | Stabilizing | 0.946 | D | 0.617 | neutral | N | 0.349013657 | None | None | N |
K/F | 0.8931 | likely_pathogenic | 0.9319 | pathogenic | -0.372 | Destabilizing | 0.976 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/G | 0.7353 | likely_pathogenic | 0.8371 | pathogenic | -0.873 | Destabilizing | 0.988 | D | 0.608 | neutral | None | None | None | None | N |
K/H | 0.3992 | ambiguous | 0.487 | ambiguous | -1.063 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
K/I | 0.4754 | ambiguous | 0.5269 | ambiguous | 0.268 | Stabilizing | 0.811 | D | 0.578 | neutral | N | 0.444378342 | None | None | N |
K/L | 0.5463 | ambiguous | 0.6307 | pathogenic | 0.268 | Stabilizing | 0.034 | N | 0.484 | neutral | None | None | None | None | N |
K/M | 0.3885 | ambiguous | 0.4644 | ambiguous | 0.047 | Stabilizing | 0.976 | D | 0.665 | neutral | None | None | None | None | N |
K/N | 0.6324 | likely_pathogenic | 0.7654 | pathogenic | -0.3 | Destabilizing | 0.995 | D | 0.643 | neutral | N | 0.447413739 | None | None | N |
K/P | 0.9649 | likely_pathogenic | 0.9812 | pathogenic | 0.025 | Stabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
K/Q | 0.1855 | likely_benign | 0.2547 | benign | -0.358 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | N | 0.447413739 | None | None | N |
K/R | 0.0871 | likely_benign | 0.0985 | benign | -0.353 | Destabilizing | 0.982 | D | 0.615 | neutral | N | 0.443872049 | None | None | N |
K/S | 0.5466 | ambiguous | 0.6981 | pathogenic | -1.001 | Destabilizing | 0.959 | D | 0.594 | neutral | None | None | None | None | N |
K/T | 0.2083 | likely_benign | 0.2878 | benign | -0.696 | Destabilizing | 0.896 | D | 0.584 | neutral | N | 0.438186984 | None | None | N |
K/V | 0.3743 | ambiguous | 0.4317 | ambiguous | 0.025 | Stabilizing | 0.034 | N | 0.487 | neutral | None | None | None | None | N |
K/W | 0.887 | likely_pathogenic | 0.9255 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/Y | 0.79 | likely_pathogenic | 0.8477 | pathogenic | 0.05 | Stabilizing | 0.996 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.