Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4722 | 14389;14390;14391 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
N2AB | 4405 | 13438;13439;13440 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
N2A | 3478 | 10657;10658;10659 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
N2B | 4359 | 13300;13301;13302 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
Novex-1 | 4484 | 13675;13676;13677 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
Novex-2 | 4551 | 13876;13877;13878 | chr2:178738289;178738288;178738287 | chr2:179603016;179603015;179603014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs767604791 | -0.482 | 0.992 | N | 0.521 | 0.312 | 0.312306559268 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs767604791 | -0.482 | 0.992 | N | 0.521 | 0.312 | 0.312306559268 | gnomAD-4.0.0 | 1.59206E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3678 | ambiguous | 0.4016 | ambiguous | -1.034 | Destabilizing | 0.996 | D | 0.615 | neutral | N | 0.492248918 | None | None | N |
E/C | 0.9607 | likely_pathogenic | 0.9608 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.5349 | ambiguous | 0.5501 | ambiguous | -1.442 | Destabilizing | 0.996 | D | 0.453 | neutral | N | 0.49237478 | None | None | N |
E/F | 0.9283 | likely_pathogenic | 0.9358 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/G | 0.5847 | likely_pathogenic | 0.596 | pathogenic | -1.432 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | N | 0.493701351 | None | None | N |
E/H | 0.762 | likely_pathogenic | 0.7767 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/I | 0.6025 | likely_pathogenic | 0.6595 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/K | 0.3914 | ambiguous | 0.3882 | ambiguous | -1.043 | Destabilizing | 0.992 | D | 0.521 | neutral | N | 0.48969392 | None | None | N |
E/L | 0.7301 | likely_pathogenic | 0.7666 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/M | 0.6699 | likely_pathogenic | 0.6995 | pathogenic | 0.6 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/N | 0.6639 | likely_pathogenic | 0.6913 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/P | 0.9867 | likely_pathogenic | 0.9875 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/Q | 0.2142 | likely_benign | 0.2283 | benign | -1.262 | Destabilizing | 0.957 | D | 0.33 | neutral | N | 0.490848369 | None | None | N |
E/R | 0.569 | likely_pathogenic | 0.5611 | ambiguous | -0.805 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.4716 | ambiguous | 0.488 | ambiguous | -1.879 | Destabilizing | 0.997 | D | 0.587 | neutral | None | None | None | None | N |
E/T | 0.4886 | ambiguous | 0.5081 | ambiguous | -1.539 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/V | 0.3901 | ambiguous | 0.4507 | ambiguous | -0.277 | Destabilizing | 0.999 | D | 0.771 | deleterious | N | 0.493701351 | None | None | N |
E/W | 0.9812 | likely_pathogenic | 0.9792 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/Y | 0.8899 | likely_pathogenic | 0.9008 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.