Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4724 | 14395;14396;14397 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
N2AB | 4407 | 13444;13445;13446 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
N2A | 3480 | 10663;10664;10665 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
N2B | 4361 | 13306;13307;13308 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
Novex-1 | 4486 | 13681;13682;13683 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
Novex-2 | 4553 | 13882;13883;13884 | chr2:178738283;178738282;178738281 | chr2:179603010;179603009;179603008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1553934896 | None | 0.024 | N | 0.144 | 0.257 | 0.294206760003 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79906E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1758 | likely_benign | 0.1955 | benign | -0.409 | Destabilizing | 0.007 | N | 0.176 | neutral | None | None | None | None | N |
Q/C | 0.5216 | ambiguous | 0.581 | pathogenic | 0.027 | Stabilizing | 0.864 | D | 0.27 | neutral | None | None | None | None | N |
Q/D | 0.2142 | likely_benign | 0.2752 | benign | -0.061 | Destabilizing | 0.007 | N | 0.125 | neutral | None | None | None | None | N |
Q/E | 0.0677 | likely_benign | 0.0717 | benign | -0.024 | Destabilizing | None | N | 0.047 | neutral | N | 0.486476387 | None | None | N |
Q/F | 0.501 | ambiguous | 0.5675 | pathogenic | -0.288 | Destabilizing | 0.214 | N | 0.353 | neutral | None | None | None | None | N |
Q/G | 0.2111 | likely_benign | 0.2576 | benign | -0.691 | Destabilizing | 0.031 | N | 0.207 | neutral | None | None | None | None | N |
Q/H | 0.1256 | likely_benign | 0.1412 | benign | -0.473 | Destabilizing | None | N | 0.101 | neutral | N | 0.49237478 | None | None | N |
Q/I | 0.3276 | likely_benign | 0.3551 | ambiguous | 0.274 | Stabilizing | 0.072 | N | 0.36 | neutral | None | None | None | None | N |
Q/K | 0.1067 | likely_benign | 0.1215 | benign | -0.155 | Destabilizing | 0.005 | N | 0.131 | neutral | N | 0.488877833 | None | None | N |
Q/L | 0.118 | likely_benign | 0.1317 | benign | 0.274 | Stabilizing | 0.024 | N | 0.215 | neutral | N | 0.398710167 | None | None | N |
Q/M | 0.3384 | likely_benign | 0.3537 | ambiguous | 0.48 | Stabilizing | 0.628 | D | 0.245 | neutral | None | None | None | None | N |
Q/N | 0.1838 | likely_benign | 0.2178 | benign | -0.634 | Destabilizing | 0.016 | N | 0.144 | neutral | None | None | None | None | N |
Q/P | 0.2127 | likely_benign | 0.3099 | benign | 0.077 | Stabilizing | 0.106 | N | 0.263 | neutral | N | 0.49262601 | None | None | N |
Q/R | 0.1072 | likely_benign | 0.1241 | benign | -0.028 | Destabilizing | 0.024 | N | 0.144 | neutral | N | 0.490265779 | None | None | N |
Q/S | 0.1829 | likely_benign | 0.1998 | benign | -0.665 | Destabilizing | 0.007 | N | 0.146 | neutral | None | None | None | None | N |
Q/T | 0.1704 | likely_benign | 0.1827 | benign | -0.447 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | N |
Q/V | 0.2188 | likely_benign | 0.2299 | benign | 0.077 | Stabilizing | 0.031 | N | 0.206 | neutral | None | None | None | None | N |
Q/W | 0.396 | ambiguous | 0.4808 | ambiguous | -0.195 | Destabilizing | 0.864 | D | 0.255 | neutral | None | None | None | None | N |
Q/Y | 0.2862 | likely_benign | 0.3271 | benign | 0.025 | Stabilizing | 0.038 | N | 0.308 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.