Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4726 | 14401;14402;14403 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
N2AB | 4409 | 13450;13451;13452 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
N2A | 3482 | 10669;10670;10671 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
N2B | 4363 | 13312;13313;13314 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
Novex-1 | 4488 | 13687;13688;13689 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
Novex-2 | 4555 | 13888;13889;13890 | chr2:178738277;178738276;178738275 | chr2:179603004;179603003;179603002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1241571397 | 0.084 | 0.031 | N | 0.278 | 0.188 | 0.541602255418 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1241571397 | 0.084 | 0.031 | N | 0.278 | 0.188 | 0.541602255418 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | I | None | 0 | 2.28718E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6037 | likely_pathogenic | 0.6412 | pathogenic | -0.651 | Destabilizing | 0.973 | D | 0.53 | neutral | None | None | None | None | I |
A/D | 0.6538 | likely_pathogenic | 0.7994 | pathogenic | -1.279 | Destabilizing | 0.782 | D | 0.683 | prob.neutral | N | 0.484833154 | None | None | I |
A/E | 0.5327 | ambiguous | 0.698 | pathogenic | -1.301 | Destabilizing | 0.704 | D | 0.497 | neutral | None | None | None | None | I |
A/F | 0.4398 | ambiguous | 0.5611 | ambiguous | -0.914 | Destabilizing | 0.906 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/G | 0.2849 | likely_benign | 0.3692 | ambiguous | -1.06 | Destabilizing | 0.338 | N | 0.493 | neutral | N | 0.487136109 | None | None | I |
A/H | 0.6975 | likely_pathogenic | 0.7862 | pathogenic | -1.299 | Destabilizing | 0.973 | D | 0.718 | prob.delet. | None | None | None | None | I |
A/I | 0.2783 | likely_benign | 0.3931 | ambiguous | -0.29 | Destabilizing | 0.404 | N | 0.517 | neutral | None | None | None | None | I |
A/K | 0.7368 | likely_pathogenic | 0.8504 | pathogenic | -1.243 | Destabilizing | 0.704 | D | 0.506 | neutral | None | None | None | None | I |
A/L | 0.2456 | likely_benign | 0.3577 | ambiguous | -0.29 | Destabilizing | 0.404 | N | 0.526 | neutral | None | None | None | None | I |
A/M | 0.3235 | likely_benign | 0.4483 | ambiguous | -0.239 | Destabilizing | 0.973 | D | 0.571 | neutral | None | None | None | None | I |
A/N | 0.5461 | ambiguous | 0.6833 | pathogenic | -0.937 | Destabilizing | 0.704 | D | 0.698 | prob.neutral | None | None | None | None | I |
A/P | 0.5668 | likely_pathogenic | 0.7346 | pathogenic | -0.424 | Destabilizing | 0.879 | D | 0.549 | neutral | N | 0.487569141 | None | None | I |
A/Q | 0.579 | likely_pathogenic | 0.7056 | pathogenic | -1.081 | Destabilizing | 0.826 | D | 0.552 | neutral | None | None | None | None | I |
A/R | 0.6389 | likely_pathogenic | 0.763 | pathogenic | -0.886 | Destabilizing | 0.826 | D | 0.545 | neutral | None | None | None | None | I |
A/S | 0.1312 | likely_benign | 0.1508 | benign | -1.195 | Destabilizing | 0.007 | N | 0.29 | neutral | N | 0.484833154 | None | None | I |
A/T | 0.1304 | likely_benign | 0.1779 | benign | -1.131 | Destabilizing | 0.013 | N | 0.297 | neutral | N | 0.484543749 | None | None | I |
A/V | 0.1335 | likely_benign | 0.188 | benign | -0.424 | Destabilizing | 0.031 | N | 0.278 | neutral | N | 0.465506486 | None | None | I |
A/W | 0.8915 | likely_pathogenic | 0.9387 | pathogenic | -1.312 | Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | I |
A/Y | 0.6661 | likely_pathogenic | 0.7683 | pathogenic | -0.89 | Destabilizing | 0.906 | D | 0.71 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.