Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4728 | 14407;14408;14409 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
N2AB | 4411 | 13456;13457;13458 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
N2A | 3484 | 10675;10676;10677 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
N2B | 4365 | 13318;13319;13320 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
Novex-1 | 4490 | 13693;13694;13695 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
Novex-2 | 4557 | 13894;13895;13896 | chr2:178738271;178738270;178738269 | chr2:179602998;179602997;179602996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.024 | N | 0.285 | 0.072 | 0.233150807113 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1651 | likely_benign | 0.1854 | benign | -0.205 | Destabilizing | 0.016 | N | 0.473 | neutral | None | None | None | None | I |
N/C | 0.3421 | ambiguous | 0.3769 | ambiguous | 0.302 | Stabilizing | 0.864 | D | 0.471 | neutral | None | None | None | None | I |
N/D | 0.0961 | likely_benign | 0.1175 | benign | 0.067 | Stabilizing | None | N | 0.148 | neutral | N | 0.487698205 | None | None | I |
N/E | 0.3076 | likely_benign | 0.3432 | ambiguous | 0.029 | Stabilizing | 0.016 | N | 0.307 | neutral | None | None | None | None | I |
N/F | 0.494 | ambiguous | 0.5632 | ambiguous | -0.626 | Destabilizing | 0.214 | N | 0.485 | neutral | None | None | None | None | I |
N/G | 0.202 | likely_benign | 0.2306 | benign | -0.363 | Destabilizing | None | N | 0.127 | neutral | None | None | None | None | I |
N/H | 0.1061 | likely_benign | 0.1127 | benign | -0.414 | Destabilizing | 0.295 | N | 0.369 | neutral | N | 0.49177538 | None | None | I |
N/I | 0.2657 | likely_benign | 0.3107 | benign | 0.121 | Stabilizing | 0.029 | N | 0.509 | neutral | N | 0.492248918 | None | None | I |
N/K | 0.2284 | likely_benign | 0.2386 | benign | 0.024 | Stabilizing | None | N | 0.211 | neutral | N | 0.487698205 | None | None | I |
N/L | 0.2468 | likely_benign | 0.2763 | benign | 0.121 | Stabilizing | None | N | 0.305 | neutral | None | None | None | None | I |
N/M | 0.3463 | ambiguous | 0.3789 | ambiguous | 0.263 | Stabilizing | 0.214 | N | 0.479 | neutral | None | None | None | None | I |
N/P | 0.5599 | ambiguous | 0.6365 | pathogenic | 0.038 | Stabilizing | 0.356 | N | 0.494 | neutral | None | None | None | None | I |
N/Q | 0.2998 | likely_benign | 0.3143 | benign | -0.309 | Destabilizing | 0.038 | N | 0.341 | neutral | None | None | None | None | I |
N/R | 0.2633 | likely_benign | 0.28 | benign | 0.056 | Stabilizing | 0.038 | N | 0.333 | neutral | None | None | None | None | I |
N/S | 0.0771 | likely_benign | 0.0835 | benign | -0.087 | Destabilizing | 0.002 | N | 0.129 | neutral | N | 0.48969392 | None | None | I |
N/T | 0.1321 | likely_benign | 0.1486 | benign | 0.004 | Stabilizing | 0.024 | N | 0.285 | neutral | N | 0.488746398 | None | None | I |
N/V | 0.239 | likely_benign | 0.2664 | benign | 0.038 | Stabilizing | 0.038 | N | 0.507 | neutral | None | None | None | None | I |
N/W | 0.7563 | likely_pathogenic | 0.8013 | pathogenic | -0.69 | Destabilizing | 0.864 | D | 0.499 | neutral | None | None | None | None | I |
N/Y | 0.1651 | likely_benign | 0.1921 | benign | -0.402 | Destabilizing | 0.56 | D | 0.485 | neutral | N | 0.492248918 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.