Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4740 | 14443;14444;14445 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
N2AB | 4423 | 13492;13493;13494 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
N2A | 3496 | 10711;10712;10713 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
N2B | 4377 | 13354;13355;13356 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
Novex-1 | 4502 | 13729;13730;13731 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
Novex-2 | 4569 | 13930;13931;13932 | chr2:178738235;178738234;178738233 | chr2:179602962;179602961;179602960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1381364366 | -1.135 | 0.003 | N | 0.16 | 0.267 | 0.496428787267 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1381364366 | -1.135 | 0.003 | N | 0.16 | 0.267 | 0.496428787267 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9406 | likely_pathogenic | 0.966 | pathogenic | -2.02 | Highly Destabilizing | 0.373 | N | 0.497 | neutral | None | None | None | None | N |
I/C | 0.973 | likely_pathogenic | 0.9837 | pathogenic | -0.999 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | N |
I/D | 0.9959 | likely_pathogenic | 0.9971 | pathogenic | -2.262 | Highly Destabilizing | 0.02 | N | 0.505 | neutral | None | None | None | None | N |
I/E | 0.9883 | likely_pathogenic | 0.9917 | pathogenic | -2.027 | Highly Destabilizing | 0.59 | D | 0.631 | neutral | None | None | None | None | N |
I/F | 0.5722 | likely_pathogenic | 0.7098 | pathogenic | -1.277 | Destabilizing | 0.884 | D | 0.576 | neutral | D | 0.5506534 | None | None | N |
I/G | 0.9885 | likely_pathogenic | 0.9934 | pathogenic | -2.517 | Highly Destabilizing | 0.953 | D | 0.621 | neutral | None | None | None | None | N |
I/H | 0.9826 | likely_pathogenic | 0.9897 | pathogenic | -1.924 | Destabilizing | 0.996 | D | 0.632 | neutral | None | None | None | None | N |
I/K | 0.9681 | likely_pathogenic | 0.9786 | pathogenic | -1.348 | Destabilizing | 0.91 | D | 0.638 | neutral | None | None | None | None | N |
I/L | 0.1972 | likely_benign | 0.3027 | benign | -0.583 | Destabilizing | 0.003 | N | 0.169 | neutral | N | 0.450274191 | None | None | N |
I/M | 0.2816 | likely_benign | 0.3557 | ambiguous | -0.429 | Destabilizing | 0.164 | N | 0.387 | neutral | D | 0.54989227 | None | None | N |
I/N | 0.9411 | likely_pathogenic | 0.9505 | pathogenic | -1.747 | Destabilizing | 0.884 | D | 0.661 | neutral | D | 0.673263123 | None | None | N |
I/P | 0.9938 | likely_pathogenic | 0.9948 | pathogenic | -1.045 | Destabilizing | 0.984 | D | 0.666 | neutral | None | None | None | None | N |
I/Q | 0.9776 | likely_pathogenic | 0.9863 | pathogenic | -1.589 | Destabilizing | 0.953 | D | 0.673 | neutral | None | None | None | None | N |
I/R | 0.9534 | likely_pathogenic | 0.9719 | pathogenic | -1.213 | Destabilizing | 0.91 | D | 0.673 | neutral | None | None | None | None | N |
I/S | 0.964 | likely_pathogenic | 0.9743 | pathogenic | -2.373 | Highly Destabilizing | 0.684 | D | 0.55 | neutral | D | 0.64418821 | None | None | N |
I/T | 0.9313 | likely_pathogenic | 0.9489 | pathogenic | -1.993 | Destabilizing | 0.684 | D | 0.507 | neutral | D | 0.689580296 | None | None | N |
I/V | 0.1943 | likely_benign | 0.2366 | benign | -1.045 | Destabilizing | 0.003 | N | 0.16 | neutral | N | 0.492079699 | None | None | N |
I/W | 0.9783 | likely_pathogenic | 0.9865 | pathogenic | -1.633 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
I/Y | 0.918 | likely_pathogenic | 0.9436 | pathogenic | -1.258 | Destabilizing | 0.953 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.