Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4748 | 14467;14468;14469 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
N2AB | 4431 | 13516;13517;13518 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
N2A | 3504 | 10735;10736;10737 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
N2B | 4385 | 13378;13379;13380 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
Novex-1 | 4510 | 13753;13754;13755 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
Novex-2 | 4577 | 13954;13955;13956 | chr2:178738211;178738210;178738209 | chr2:179602938;179602937;179602936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs753460929 | -0.965 | 0.008 | N | 0.165 | 0.08 | 0.415820034956 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/V | rs753460929 | -0.965 | 0.008 | N | 0.165 | 0.08 | 0.415820034956 | gnomAD-4.0.0 | 3.18313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77932E-05 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7954 | likely_pathogenic | 0.8817 | pathogenic | -1.944 | Destabilizing | 0.633 | D | 0.532 | neutral | None | None | None | None | N |
I/C | 0.9104 | likely_pathogenic | 0.9563 | pathogenic | -1.261 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
I/D | 0.9839 | likely_pathogenic | 0.9907 | pathogenic | -1.23 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | N |
I/E | 0.9375 | likely_pathogenic | 0.9614 | pathogenic | -1.173 | Destabilizing | 0.961 | D | 0.77 | deleterious | None | None | None | None | N |
I/F | 0.2593 | likely_benign | 0.3906 | ambiguous | -1.341 | Destabilizing | 0.82 | D | 0.517 | neutral | N | 0.481805196 | None | None | N |
I/G | 0.9502 | likely_pathogenic | 0.9753 | pathogenic | -2.333 | Highly Destabilizing | 0.961 | D | 0.76 | deleterious | None | None | None | None | N |
I/H | 0.8813 | likely_pathogenic | 0.9256 | pathogenic | -1.571 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
I/K | 0.8275 | likely_pathogenic | 0.8816 | pathogenic | -1.234 | Destabilizing | 0.961 | D | 0.766 | deleterious | None | None | None | None | N |
I/L | 0.177 | likely_benign | 0.2262 | benign | -0.916 | Destabilizing | 0.003 | N | 0.146 | neutral | N | 0.39908953 | None | None | N |
I/M | 0.1843 | likely_benign | 0.24 | benign | -0.753 | Destabilizing | 0.901 | D | 0.524 | neutral | N | 0.480734311 | None | None | N |
I/N | 0.822 | likely_pathogenic | 0.8753 | pathogenic | -1.113 | Destabilizing | 0.983 | D | 0.786 | deleterious | N | 0.483451722 | None | None | N |
I/P | 0.9761 | likely_pathogenic | 0.9847 | pathogenic | -1.229 | Destabilizing | 0.987 | D | 0.789 | deleterious | None | None | None | None | N |
I/Q | 0.8397 | likely_pathogenic | 0.8902 | pathogenic | -1.222 | Destabilizing | 0.987 | D | 0.784 | deleterious | None | None | None | None | N |
I/R | 0.7415 | likely_pathogenic | 0.8281 | pathogenic | -0.74 | Destabilizing | 0.961 | D | 0.787 | deleterious | None | None | None | None | N |
I/S | 0.782 | likely_pathogenic | 0.8559 | pathogenic | -1.843 | Destabilizing | 0.901 | D | 0.678 | prob.neutral | N | 0.482800732 | None | None | N |
I/T | 0.7101 | likely_pathogenic | 0.8015 | pathogenic | -1.655 | Destabilizing | 0.722 | D | 0.597 | neutral | N | 0.482252887 | None | None | N |
I/V | 0.0991 | likely_benign | 0.1358 | benign | -1.229 | Destabilizing | 0.008 | N | 0.165 | neutral | N | 0.474685462 | None | None | N |
I/W | 0.8908 | likely_pathogenic | 0.9374 | pathogenic | -1.449 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
I/Y | 0.7564 | likely_pathogenic | 0.8254 | pathogenic | -1.207 | Destabilizing | 0.961 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.