Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4763 | 14512;14513;14514 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
N2AB | 4446 | 13561;13562;13563 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
N2A | 3519 | 10780;10781;10782 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
N2B | 4400 | 13423;13424;13425 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
Novex-1 | 4525 | 13798;13799;13800 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
Novex-2 | 4592 | 13999;14000;14001 | chr2:178738166;178738165;178738164 | chr2:179602893;179602892;179602891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs1187967109 | 0.227 | 0.679 | N | 0.213 | 0.197 | 0.177238962908 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/L | rs1574049717 | None | 0.316 | N | 0.252 | 0.298 | 0.493896554345 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | I | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4247 | ambiguous | 0.4254 | ambiguous | -0.347 | Destabilizing | 0.037 | N | 0.146 | neutral | None | None | None | None | I |
Q/C | 0.9549 | likely_pathogenic | 0.956 | pathogenic | 0.172 | Stabilizing | 0.993 | D | 0.323 | neutral | None | None | None | None | I |
Q/D | 0.7426 | likely_pathogenic | 0.7807 | pathogenic | 0.139 | Stabilizing | 0.932 | D | 0.189 | neutral | None | None | None | None | I |
Q/E | 0.1389 | likely_benign | 0.157 | benign | 0.163 | Stabilizing | 0.811 | D | 0.273 | neutral | N | 0.464614946 | None | None | I |
Q/F | 0.9534 | likely_pathogenic | 0.95 | pathogenic | -0.319 | Destabilizing | 0.98 | D | 0.367 | neutral | None | None | None | None | I |
Q/G | 0.594 | likely_pathogenic | 0.5785 | pathogenic | -0.611 | Destabilizing | 0.584 | D | 0.364 | neutral | None | None | None | None | I |
Q/H | 0.6141 | likely_pathogenic | 0.6211 | pathogenic | -0.408 | Destabilizing | 0.991 | D | 0.295 | neutral | N | 0.468322411 | None | None | I |
Q/I | 0.8293 | likely_pathogenic | 0.8321 | pathogenic | 0.28 | Stabilizing | 0.037 | N | 0.208 | neutral | None | None | None | None | I |
Q/K | 0.3073 | likely_benign | 0.2972 | benign | 0.012 | Stabilizing | 0.679 | D | 0.213 | neutral | N | 0.465176892 | None | None | I |
Q/L | 0.4334 | ambiguous | 0.4288 | ambiguous | 0.28 | Stabilizing | 0.316 | N | 0.252 | neutral | N | 0.468019217 | None | None | I |
Q/M | 0.6555 | likely_pathogenic | 0.6334 | pathogenic | 0.553 | Stabilizing | 0.98 | D | 0.255 | neutral | None | None | None | None | I |
Q/N | 0.5284 | ambiguous | 0.5486 | ambiguous | -0.418 | Destabilizing | 0.977 | D | 0.247 | neutral | None | None | None | None | I |
Q/P | 0.8295 | likely_pathogenic | 0.833 | pathogenic | 0.102 | Stabilizing | 0.912 | D | 0.345 | neutral | N | 0.419640354 | None | None | I |
Q/R | 0.3091 | likely_benign | 0.295 | benign | 0.129 | Stabilizing | 0.912 | D | 0.227 | neutral | N | 0.467074638 | None | None | I |
Q/S | 0.4269 | ambiguous | 0.4114 | ambiguous | -0.479 | Destabilizing | 0.584 | D | 0.221 | neutral | None | None | None | None | I |
Q/T | 0.436 | ambiguous | 0.4022 | ambiguous | -0.272 | Destabilizing | 0.737 | D | 0.331 | neutral | None | None | None | None | I |
Q/V | 0.5986 | likely_pathogenic | 0.5962 | pathogenic | 0.102 | Stabilizing | 0.013 | N | 0.133 | neutral | None | None | None | None | I |
Q/W | 0.9456 | likely_pathogenic | 0.9381 | pathogenic | -0.242 | Destabilizing | 0.998 | D | 0.321 | neutral | None | None | None | None | I |
Q/Y | 0.8972 | likely_pathogenic | 0.9004 | pathogenic | -0.009 | Destabilizing | 0.993 | D | 0.342 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.