Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4769 | 14530;14531;14532 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
N2AB | 4452 | 13579;13580;13581 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
N2A | 3525 | 10798;10799;10800 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
N2B | 4406 | 13441;13442;13443 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
Novex-1 | 4531 | 13816;13817;13818 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
Novex-2 | 4598 | 14017;14018;14019 | chr2:178738148;178738147;178738146 | chr2:179602875;179602874;179602873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | D | 0.749 | 0.587 | 0.552451585512 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs566108422 | 0.602 | 1.0 | N | 0.639 | 0.315 | None | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | I | None | 2.58365E-04 | 5.8E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.78E-05 | 1.65782E-04 |
E/K | rs566108422 | 0.602 | 1.0 | N | 0.639 | 0.315 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 1.20633E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs566108422 | 0.602 | 1.0 | N | 0.639 | 0.315 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs566108422 | 0.602 | 1.0 | N | 0.639 | 0.315 | None | gnomAD-4.0.0 | 1.4252E-05 | None | None | None | None | I | None | 1.0661E-04 | 4.99833E-05 | None | 0 | 2.22955E-05 | None | 0 | 0 | 7.62857E-06 | 1.09796E-05 | 1.60061E-05 |
E/V | rs763092484 | -0.007 | 1.0 | N | 0.779 | 0.498 | 0.558850992237 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 1.93748E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs763092484 | -0.007 | 1.0 | N | 0.779 | 0.498 | 0.558850992237 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs763092484 | -0.007 | 1.0 | N | 0.779 | 0.498 | 0.558850992237 | gnomAD-4.0.0 | 7.68647E-06 | None | None | None | None | I | None | 1.01464E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2452 | likely_benign | 0.3423 | ambiguous | -0.647 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | D | 0.550788561 | None | None | I |
E/C | 0.9477 | likely_pathogenic | 0.9663 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/D | 0.1888 | likely_benign | 0.2463 | benign | -0.492 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.511545165 | None | None | I |
E/F | 0.8527 | likely_pathogenic | 0.9024 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
E/G | 0.3829 | ambiguous | 0.528 | ambiguous | -0.883 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.701128233 | None | None | I |
E/H | 0.6786 | likely_pathogenic | 0.7829 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/I | 0.4191 | ambiguous | 0.4853 | ambiguous | -0.043 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/K | 0.2462 | likely_benign | 0.3555 | ambiguous | 0.254 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.506356399 | None | None | I |
E/L | 0.5228 | ambiguous | 0.6204 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/M | 0.5554 | ambiguous | 0.6497 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
E/N | 0.3504 | ambiguous | 0.4715 | ambiguous | -0.124 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/P | 0.7753 | likely_pathogenic | 0.8252 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/Q | 0.2111 | likely_benign | 0.2851 | benign | -0.084 | Destabilizing | 1.0 | D | 0.65 | neutral | N | 0.506294339 | None | None | I |
E/R | 0.4342 | ambiguous | 0.551 | ambiguous | 0.36 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/S | 0.3109 | likely_benign | 0.4304 | ambiguous | -0.303 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
E/T | 0.299 | likely_benign | 0.3993 | ambiguous | -0.103 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
E/V | 0.2672 | likely_benign | 0.3308 | benign | -0.224 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.509202351 | None | None | I |
E/W | 0.9557 | likely_pathogenic | 0.9742 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
E/Y | 0.7783 | likely_pathogenic | 0.8549 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.