Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4777 | 14554;14555;14556 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
N2AB | 4460 | 13603;13604;13605 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
N2A | 3533 | 10822;10823;10824 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
N2B | 4414 | 13465;13466;13467 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
Novex-1 | 4539 | 13840;13841;13842 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
Novex-2 | 4606 | 14041;14042;14043 | chr2:178738124;178738123;178738122 | chr2:179602851;179602850;179602849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs747457945 | 0.107 | 0.425 | N | 0.329 | 0.256 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/A | rs747457945 | 0.107 | 0.425 | N | 0.329 | 0.256 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.23E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs747457945 | 0.107 | 0.425 | N | 0.329 | 0.256 | None | gnomAD-4.0.0 | 2.35483E-05 | None | None | None | None | I | None | 4.00352E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88192E-05 | 0 | 1.60123E-05 |
E/K | rs1405978578 | 0.652 | 0.27 | N | 0.269 | 0.26 | 0.276898752692 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1405978578 | 0.652 | 0.27 | N | 0.269 | 0.26 | 0.276898752692 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | I | None | 5.65547E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.784 | N | 0.358 | 0.35 | 0.448498829774 | gnomAD-4.0.0 | 6.84233E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99493E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1591 | likely_benign | 0.1691 | benign | -0.409 | Destabilizing | 0.425 | N | 0.329 | neutral | N | 0.44464574 | None | None | I |
E/C | 0.8939 | likely_pathogenic | 0.9111 | pathogenic | -0.254 | Destabilizing | 0.995 | D | 0.239 | neutral | None | None | None | None | I |
E/D | 0.189 | likely_benign | 0.2014 | benign | -0.375 | Destabilizing | 0.425 | N | 0.341 | neutral | N | 0.445100545 | None | None | I |
E/F | 0.8176 | likely_pathogenic | 0.8439 | pathogenic | -0.12 | Destabilizing | 0.981 | D | 0.263 | neutral | None | None | None | None | I |
E/G | 0.2345 | likely_benign | 0.2668 | benign | -0.618 | Destabilizing | 0.425 | N | 0.297 | neutral | N | 0.445100545 | None | None | I |
E/H | 0.5628 | ambiguous | 0.5913 | pathogenic | 0.284 | Stabilizing | 0.944 | D | 0.247 | neutral | None | None | None | None | I |
E/I | 0.347 | ambiguous | 0.3883 | ambiguous | 0.116 | Stabilizing | 0.944 | D | 0.293 | neutral | None | None | None | None | I |
E/K | 0.1416 | likely_benign | 0.163 | benign | 0.249 | Stabilizing | 0.27 | N | 0.269 | neutral | N | 0.418993602 | None | None | I |
E/L | 0.4666 | ambiguous | 0.4979 | ambiguous | 0.116 | Stabilizing | 0.704 | D | 0.328 | neutral | None | None | None | None | I |
E/M | 0.4867 | ambiguous | 0.5269 | ambiguous | 0.08 | Stabilizing | 0.944 | D | 0.289 | neutral | None | None | None | None | I |
E/N | 0.3483 | ambiguous | 0.3689 | ambiguous | -0.206 | Destabilizing | 0.704 | D | 0.281 | neutral | None | None | None | None | I |
E/P | 0.5022 | ambiguous | 0.5149 | ambiguous | -0.039 | Destabilizing | 0.003 | N | 0.153 | neutral | None | None | None | None | I |
E/Q | 0.1522 | likely_benign | 0.1588 | benign | -0.133 | Destabilizing | 0.003 | N | 0.155 | neutral | N | 0.419722719 | None | None | I |
E/R | 0.2518 | likely_benign | 0.2784 | benign | 0.579 | Stabilizing | 0.007 | N | 0.207 | neutral | None | None | None | None | I |
E/S | 0.248 | likely_benign | 0.2679 | benign | -0.358 | Destabilizing | 0.495 | N | 0.295 | neutral | None | None | None | None | I |
E/T | 0.2421 | likely_benign | 0.2695 | benign | -0.174 | Destabilizing | 0.704 | D | 0.325 | neutral | None | None | None | None | I |
E/V | 0.2357 | likely_benign | 0.2636 | benign | -0.039 | Destabilizing | 0.784 | D | 0.358 | neutral | N | 0.445521426 | None | None | I |
E/W | 0.9354 | likely_pathogenic | 0.947 | pathogenic | 0.083 | Stabilizing | 0.995 | D | 0.251 | neutral | None | None | None | None | I |
E/Y | 0.6953 | likely_pathogenic | 0.7354 | pathogenic | 0.137 | Stabilizing | 0.981 | D | 0.299 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.