Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4783 | 14572;14573;14574 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
N2AB | 4466 | 13621;13622;13623 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
N2A | 3539 | 10840;10841;10842 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
N2B | 4420 | 13483;13484;13485 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
Novex-1 | 4545 | 13858;13859;13860 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
Novex-2 | 4612 | 14059;14060;14061 | chr2:178738106;178738105;178738104 | chr2:179602833;179602832;179602831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs748913179 | -1.46 | 0.046 | N | 0.478 | 0.258 | 0.547384771329 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
C/S | rs748913179 | -1.46 | 0.046 | N | 0.478 | 0.258 | 0.547384771329 | gnomAD-4.0.0 | 1.59194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4763 | ambiguous | 0.4343 | ambiguous | -1.675 | Destabilizing | 0.702 | D | 0.595 | neutral | None | None | None | None | N |
C/D | 0.7983 | likely_pathogenic | 0.8518 | pathogenic | -0.347 | Destabilizing | 0.976 | D | 0.831 | deleterious | None | None | None | None | N |
C/E | 0.9233 | likely_pathogenic | 0.9421 | pathogenic | -0.277 | Destabilizing | 0.976 | D | 0.83 | deleterious | None | None | None | None | N |
C/F | 0.5403 | ambiguous | 0.5501 | ambiguous | -1.147 | Destabilizing | 0.995 | D | 0.81 | deleterious | D | 0.545431868 | None | None | N |
C/G | 0.294 | likely_benign | 0.289 | benign | -1.955 | Destabilizing | 0.811 | D | 0.821 | deleterious | N | 0.5112759 | None | None | N |
C/H | 0.8317 | likely_pathogenic | 0.8319 | pathogenic | -1.985 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
C/I | 0.7832 | likely_pathogenic | 0.7984 | pathogenic | -0.966 | Destabilizing | 0.988 | D | 0.831 | deleterious | None | None | None | None | N |
C/K | 0.9745 | likely_pathogenic | 0.9747 | pathogenic | -0.92 | Destabilizing | 0.976 | D | 0.834 | deleterious | None | None | None | None | N |
C/L | 0.7511 | likely_pathogenic | 0.7405 | pathogenic | -0.966 | Destabilizing | 0.919 | D | 0.792 | deleterious | None | None | None | None | N |
C/M | 0.8011 | likely_pathogenic | 0.7928 | pathogenic | -0.093 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
C/N | 0.6965 | likely_pathogenic | 0.7096 | pathogenic | -0.772 | Destabilizing | 0.976 | D | 0.829 | deleterious | None | None | None | None | N |
C/P | 0.9955 | likely_pathogenic | 0.9954 | pathogenic | -1.177 | Destabilizing | 0.988 | D | 0.851 | deleterious | None | None | None | None | N |
C/Q | 0.8734 | likely_pathogenic | 0.879 | pathogenic | -0.773 | Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | N |
C/R | 0.8629 | likely_pathogenic | 0.8658 | pathogenic | -0.71 | Destabilizing | 0.968 | D | 0.856 | deleterious | N | 0.505985962 | None | None | N |
C/S | 0.2041 | likely_benign | 0.1928 | benign | -1.319 | Destabilizing | 0.046 | N | 0.478 | neutral | N | 0.460136404 | None | None | N |
C/T | 0.3995 | ambiguous | 0.3566 | ambiguous | -1.079 | Destabilizing | 0.851 | D | 0.791 | deleterious | None | None | None | None | N |
C/V | 0.6384 | likely_pathogenic | 0.6329 | pathogenic | -1.177 | Destabilizing | 0.919 | D | 0.817 | deleterious | None | None | None | None | N |
C/W | 0.8693 | likely_pathogenic | 0.8778 | pathogenic | -1.099 | Destabilizing | 0.999 | D | 0.783 | deleterious | N | 0.507979455 | None | None | N |
C/Y | 0.72 | likely_pathogenic | 0.7266 | pathogenic | -1.088 | Destabilizing | 0.995 | D | 0.817 | deleterious | N | 0.511408116 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.