Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4788 | 14587;14588;14589 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
N2AB | 4471 | 13636;13637;13638 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
N2A | 3544 | 10855;10856;10857 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
N2B | 4425 | 13498;13499;13500 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
Novex-1 | 4550 | 13873;13874;13875 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
Novex-2 | 4617 | 14074;14075;14076 | chr2:178738091;178738090;178738089 | chr2:179602818;179602817;179602816 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.606 | N | 0.293 | 0.251 | 0.40318662893 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1172 | likely_benign | 0.1239 | benign | -0.826 | Destabilizing | 0.953 | D | 0.47 | neutral | D | 0.539205149 | None | None | I |
T/C | 0.5793 | likely_pathogenic | 0.6145 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | I |
T/D | 0.5247 | ambiguous | 0.5578 | ambiguous | -0.475 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | I |
T/E | 0.3707 | ambiguous | 0.4196 | ambiguous | -0.486 | Destabilizing | 0.985 | D | 0.508 | neutral | None | None | None | None | I |
T/F | 0.2607 | likely_benign | 0.2721 | benign | -0.966 | Destabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | I |
T/G | 0.4354 | ambiguous | 0.4505 | ambiguous | -1.068 | Destabilizing | 0.993 | D | 0.595 | neutral | None | None | None | None | I |
T/H | 0.2457 | likely_benign | 0.2563 | benign | -1.404 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
T/I | 0.1858 | likely_benign | 0.2018 | benign | -0.277 | Destabilizing | 0.606 | D | 0.293 | neutral | N | 0.512505032 | None | None | I |
T/K | 0.2039 | likely_benign | 0.2214 | benign | -0.785 | Destabilizing | 0.671 | D | 0.293 | neutral | None | None | None | None | I |
T/L | 0.1167 | likely_benign | 0.125 | benign | -0.277 | Destabilizing | 0.931 | D | 0.495 | neutral | None | None | None | None | I |
T/M | 0.0965 | likely_benign | 0.1068 | benign | 0.076 | Stabilizing | 0.998 | D | 0.568 | neutral | None | None | None | None | I |
T/N | 0.1505 | likely_benign | 0.1582 | benign | -0.723 | Destabilizing | 0.997 | D | 0.461 | neutral | N | 0.513841015 | None | None | I |
T/P | 0.7106 | likely_pathogenic | 0.711 | pathogenic | -0.428 | Destabilizing | 0.999 | D | 0.559 | neutral | D | 0.721921747 | None | None | I |
T/Q | 0.2378 | likely_benign | 0.2609 | benign | -0.956 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | I |
T/R | 0.1568 | likely_benign | 0.1748 | benign | -0.514 | Destabilizing | 0.991 | D | 0.542 | neutral | None | None | None | None | I |
T/S | 0.1403 | likely_benign | 0.1493 | benign | -0.974 | Destabilizing | 0.98 | D | 0.484 | neutral | N | 0.512818854 | None | None | I |
T/V | 0.1649 | likely_benign | 0.1802 | benign | -0.428 | Destabilizing | 0.469 | N | 0.272 | neutral | None | None | None | None | I |
T/W | 0.6116 | likely_pathogenic | 0.6629 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
T/Y | 0.306 | likely_benign | 0.3228 | benign | -0.648 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.