Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4796 | 14611;14612;14613 | chr2:178736060;178736059;178736058 | chr2:179600787;179600786;179600785 |
N2AB | 4479 | 13660;13661;13662 | chr2:178736060;178736059;178736058 | chr2:179600787;179600786;179600785 |
N2A | 3552 | 10879;10880;10881 | chr2:178736060;178736059;178736058 | chr2:179600787;179600786;179600785 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs780971372 | -0.663 | None | N | 0.121 | 0.07 | 0.130388298395 | gnomAD-2.1.1 | 1.8E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.86E-05 | 0 |
T/A | rs780971372 | -0.663 | None | N | 0.121 | 0.07 | 0.130388298395 | gnomAD-4.0.0 | 1.67824E-05 | None | None | None | None | I | None | 3.10347E-05 | 0 | None | 0 | 0 | None | 0 | 3.57015E-04 | 1.45896E-05 | 0 | 8.48522E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0617 | likely_benign | 0.0656 | benign | -0.815 | Destabilizing | None | N | 0.121 | neutral | N | 0.487274376 | None | None | I |
T/C | 0.3107 | likely_benign | 0.3551 | ambiguous | -0.429 | Destabilizing | 0.356 | N | 0.304 | neutral | None | None | None | None | I |
T/D | 0.3379 | likely_benign | 0.3794 | ambiguous | 0.465 | Stabilizing | 0.038 | N | 0.279 | neutral | None | None | None | None | I |
T/E | 0.2609 | likely_benign | 0.3027 | benign | 0.472 | Stabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | I |
T/F | 0.161 | likely_benign | 0.1919 | benign | -0.956 | Destabilizing | 0.214 | N | 0.37 | neutral | None | None | None | None | I |
T/G | 0.1861 | likely_benign | 0.209 | benign | -1.058 | Destabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | I |
T/H | 0.2043 | likely_benign | 0.2199 | benign | -1.213 | Destabilizing | 0.628 | D | 0.29 | neutral | None | None | None | None | I |
T/I | 0.0962 | likely_benign | 0.1101 | benign | -0.262 | Destabilizing | None | N | 0.19 | neutral | N | 0.39908953 | None | None | I |
T/K | 0.1744 | likely_benign | 0.1994 | benign | -0.35 | Destabilizing | 0.072 | N | 0.267 | neutral | None | None | None | None | I |
T/L | 0.0735 | likely_benign | 0.0814 | benign | -0.262 | Destabilizing | 0.002 | N | 0.215 | neutral | None | None | None | None | I |
T/M | 0.0792 | likely_benign | 0.088 | benign | -0.123 | Destabilizing | 0.002 | N | 0.199 | neutral | None | None | None | None | I |
T/N | 0.1036 | likely_benign | 0.1115 | benign | -0.31 | Destabilizing | 0.055 | N | 0.247 | neutral | N | 0.495912429 | None | None | I |
T/P | 0.4218 | ambiguous | 0.4714 | ambiguous | -0.415 | Destabilizing | 0.106 | N | 0.355 | neutral | N | 0.512631981 | None | None | I |
T/Q | 0.1834 | likely_benign | 0.1995 | benign | -0.415 | Destabilizing | 0.072 | N | 0.38 | neutral | None | None | None | None | I |
T/R | 0.1288 | likely_benign | 0.1498 | benign | -0.195 | Destabilizing | 0.072 | N | 0.379 | neutral | None | None | None | None | I |
T/S | 0.0805 | likely_benign | 0.0847 | benign | -0.692 | Destabilizing | None | N | 0.122 | neutral | N | 0.462911917 | None | None | I |
T/V | 0.0831 | likely_benign | 0.0877 | benign | -0.415 | Destabilizing | None | N | 0.104 | neutral | None | None | None | None | I |
T/W | 0.5238 | ambiguous | 0.6096 | pathogenic | -0.867 | Destabilizing | 0.864 | D | 0.334 | neutral | None | None | None | None | I |
T/Y | 0.207 | likely_benign | 0.239 | benign | -0.613 | Destabilizing | 0.356 | N | 0.338 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.