Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4798 | 14617;14618;14619 | chr2:178736054;178736053;178736052 | chr2:179600781;179600780;179600779 |
N2AB | 4481 | 13666;13667;13668 | chr2:178736054;178736053;178736052 | chr2:179600781;179600780;179600779 |
N2A | 3554 | 10885;10886;10887 | chr2:178736054;178736053;178736052 | chr2:179600781;179600780;179600779 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2081388048 | None | None | D | 0.152 | 0.235 | 0.287603790349 | gnomAD-4.0.0 | 1.65128E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.95412E-06 | 0 | 0 |
L/P | None | None | None | D | 0.283 | 0.233 | 0.479818277033 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2016 | likely_benign | 0.1948 | benign | -0.439 | Destabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | I |
L/C | 0.3205 | likely_benign | 0.3122 | benign | -0.59 | Destabilizing | 0.676 | D | 0.234 | neutral | None | None | None | None | I |
L/D | 0.5287 | ambiguous | 0.4918 | ambiguous | 0.326 | Stabilizing | 0.356 | N | 0.323 | neutral | None | None | None | None | I |
L/E | 0.306 | likely_benign | 0.2897 | benign | 0.24 | Stabilizing | 0.072 | N | 0.333 | neutral | None | None | None | None | I |
L/F | 0.0714 | likely_benign | 0.0702 | benign | -0.463 | Destabilizing | None | N | 0.152 | neutral | D | 0.528361718 | None | None | I |
L/G | 0.4409 | ambiguous | 0.4149 | ambiguous | -0.592 | Destabilizing | 0.072 | N | 0.351 | neutral | None | None | None | None | I |
L/H | 0.1253 | likely_benign | 0.1139 | benign | 0.056 | Stabilizing | 0.171 | N | 0.249 | neutral | N | 0.497773196 | None | None | I |
L/I | 0.0634 | likely_benign | 0.0642 | benign | -0.164 | Destabilizing | 0.004 | N | 0.218 | neutral | N | 0.349772382 | None | None | I |
L/K | 0.2676 | likely_benign | 0.2533 | benign | -0.083 | Destabilizing | 0.038 | N | 0.321 | neutral | None | None | None | None | I |
L/M | 0.1246 | likely_benign | 0.1279 | benign | -0.238 | Destabilizing | 0.214 | N | 0.315 | neutral | None | None | None | None | I |
L/N | 0.2655 | likely_benign | 0.2348 | benign | 0.071 | Stabilizing | 0.214 | N | 0.315 | neutral | None | None | None | None | I |
L/P | 0.6036 | likely_pathogenic | 0.5499 | ambiguous | -0.222 | Destabilizing | None | N | 0.283 | neutral | D | 0.592554565 | None | None | I |
L/Q | 0.1283 | likely_benign | 0.1202 | benign | -0.115 | Destabilizing | 0.214 | N | 0.289 | neutral | None | None | None | None | I |
L/R | 0.1609 | likely_benign | 0.1493 | benign | 0.365 | Stabilizing | None | N | 0.244 | neutral | N | 0.457000484 | None | None | I |
L/S | 0.1699 | likely_benign | 0.1701 | benign | -0.446 | Destabilizing | 0.072 | N | 0.348 | neutral | None | None | None | None | I |
L/T | 0.1591 | likely_benign | 0.1591 | benign | -0.42 | Destabilizing | 0.038 | N | 0.293 | neutral | None | None | None | None | I |
L/V | 0.0718 | likely_benign | 0.0725 | benign | -0.222 | Destabilizing | None | N | 0.119 | neutral | N | 0.439920088 | None | None | I |
L/W | 0.1613 | likely_benign | 0.1676 | benign | -0.485 | Destabilizing | 0.676 | D | 0.235 | neutral | None | None | None | None | I |
L/Y | 0.149 | likely_benign | 0.1364 | benign | -0.206 | Destabilizing | None | N | 0.17 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.