Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4800 | 14623;14624;14625 | chr2:178736048;178736047;178736046 | chr2:179600775;179600774;179600773 |
N2AB | 4483 | 13672;13673;13674 | chr2:178736048;178736047;178736046 | chr2:179600775;179600774;179600773 |
N2A | 3556 | 10891;10892;10893 | chr2:178736048;178736047;178736046 | chr2:179600775;179600774;179600773 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs751522505 | -0.046 | 0.826 | N | 0.477 | 0.342 | 0.278968121808 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.67E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5957 | likely_pathogenic | 0.7205 | pathogenic | -0.77 | Destabilizing | 0.863 | D | 0.477 | neutral | None | None | None | None | N |
R/C | 0.2177 | likely_benign | 0.3688 | ambiguous | -0.681 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
R/D | 0.9013 | likely_pathogenic | 0.9479 | pathogenic | 0.057 | Stabilizing | 0.884 | D | 0.531 | neutral | None | None | None | None | N |
R/E | 0.5578 | ambiguous | 0.6725 | pathogenic | 0.181 | Stabilizing | 0.863 | D | 0.449 | neutral | None | None | None | None | N |
R/F | 0.6976 | likely_pathogenic | 0.8063 | pathogenic | -0.667 | Destabilizing | 0.997 | D | 0.488 | neutral | None | None | None | None | N |
R/G | 0.4567 | ambiguous | 0.6165 | pathogenic | -1.066 | Destabilizing | 0.92 | D | 0.521 | neutral | N | 0.485538884 | None | None | N |
R/H | 0.148 | likely_benign | 0.2012 | benign | -1.461 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | N |
R/I | 0.4784 | ambiguous | 0.6144 | pathogenic | 0.019 | Stabilizing | 0.996 | D | 0.505 | neutral | N | 0.475839647 | None | None | N |
R/K | 0.1491 | likely_benign | 0.1513 | benign | -0.634 | Destabilizing | 0.021 | N | 0.156 | neutral | N | 0.414667604 | None | None | N |
R/L | 0.3882 | ambiguous | 0.5138 | ambiguous | 0.019 | Stabilizing | 0.969 | D | 0.543 | neutral | None | None | None | None | N |
R/M | 0.4828 | ambiguous | 0.5989 | pathogenic | -0.339 | Destabilizing | 0.997 | D | 0.491 | neutral | None | None | None | None | N |
R/N | 0.8151 | likely_pathogenic | 0.8877 | pathogenic | -0.175 | Destabilizing | 0.17 | N | 0.191 | neutral | None | None | None | None | N |
R/P | 0.6089 | likely_pathogenic | 0.7291 | pathogenic | -0.224 | Destabilizing | 0.997 | D | 0.499 | neutral | None | None | None | None | N |
R/Q | 0.142 | likely_benign | 0.1822 | benign | -0.322 | Destabilizing | 0.939 | D | 0.487 | neutral | None | None | None | None | N |
R/S | 0.6875 | likely_pathogenic | 0.8057 | pathogenic | -0.935 | Destabilizing | 0.826 | D | 0.477 | neutral | N | 0.490136297 | None | None | N |
R/T | 0.5021 | ambiguous | 0.6344 | pathogenic | -0.626 | Destabilizing | 0.92 | D | 0.499 | neutral | N | 0.487512472 | None | None | N |
R/V | 0.5708 | likely_pathogenic | 0.6847 | pathogenic | -0.224 | Destabilizing | 0.969 | D | 0.508 | neutral | None | None | None | None | N |
R/W | 0.2497 | likely_benign | 0.4026 | ambiguous | -0.373 | Destabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | N |
R/Y | 0.4858 | ambiguous | 0.645 | pathogenic | -0.07 | Destabilizing | 0.997 | D | 0.522 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.