Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4801 | 14626;14627;14628 | chr2:178736045;178736044;178736043 | chr2:179600772;179600771;179600770 |
N2AB | 4484 | 13675;13676;13677 | chr2:178736045;178736044;178736043 | chr2:179600772;179600771;179600770 |
N2A | 3557 | 10894;10895;10896 | chr2:178736045;178736044;178736043 | chr2:179600772;179600771;179600770 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs780021536 | -0.239 | 0.64 | N | 0.595 | 0.324 | 0.343101102393 | gnomAD-2.1.1 | 4.22E-06 | None | None | None | None | I | None | 6.58E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs780021536 | -0.239 | 0.64 | N | 0.595 | 0.324 | 0.343101102393 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs780021536 | -0.239 | 0.64 | N | 0.595 | 0.324 | 0.343101102393 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | I | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | None | None | 0.999 | N | 0.781 | 0.4 | 0.312001716656 | gnomAD-4.0.0 | 1.63352E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.90331E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5831 | likely_pathogenic | 0.6902 | pathogenic | -1.68 | Destabilizing | 0.998 | D | 0.646 | neutral | N | 0.41937818 | None | None | I |
P/C | 0.944 | likely_pathogenic | 0.9727 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
P/D | 0.9942 | likely_pathogenic | 0.9976 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/E | 0.9709 | likely_pathogenic | 0.9882 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
P/F | 0.9749 | likely_pathogenic | 0.9895 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | I |
P/G | 0.9347 | likely_pathogenic | 0.9631 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
P/H | 0.9622 | likely_pathogenic | 0.9839 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.4553486 | None | None | I |
P/I | 0.7889 | likely_pathogenic | 0.8644 | pathogenic | -0.439 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | I |
P/K | 0.9798 | likely_pathogenic | 0.9929 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
P/L | 0.4526 | ambiguous | 0.5365 | ambiguous | -0.439 | Destabilizing | 0.64 | D | 0.595 | neutral | N | 0.281982996 | None | None | I |
P/M | 0.837 | likely_pathogenic | 0.8868 | pathogenic | -0.371 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
P/N | 0.9833 | likely_pathogenic | 0.9916 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
P/Q | 0.9189 | likely_pathogenic | 0.9624 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/R | 0.9557 | likely_pathogenic | 0.9831 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.44940679 | None | None | I |
P/S | 0.9105 | likely_pathogenic | 0.9525 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.439620864 | None | None | I |
P/T | 0.7915 | likely_pathogenic | 0.8708 | pathogenic | -1.637 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.431825857 | None | None | I |
P/V | 0.7149 | likely_pathogenic | 0.7968 | pathogenic | -0.821 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | I |
P/W | 0.9928 | likely_pathogenic | 0.9979 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
P/Y | 0.9866 | likely_pathogenic | 0.9956 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.