Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4808 | 14647;14648;14649 | chr2:178736024;178736023;178736022 | chr2:179600751;179600750;179600749 |
N2AB | 4491 | 13696;13697;13698 | chr2:178736024;178736023;178736022 | chr2:179600751;179600750;179600749 |
N2A | 3564 | 10915;10916;10917 | chr2:178736024;178736023;178736022 | chr2:179600751;179600750;179600749 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.999 | N | 0.495 | 0.248 | 0.367042808489 | gnomAD-4.0.0 | 1.59814E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87054E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1461 | likely_benign | 0.1832 | benign | -1.034 | Destabilizing | 0.948 | D | 0.427 | neutral | N | 0.366836648 | None | None | I |
V/C | 0.8249 | likely_pathogenic | 0.8846 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | I |
V/D | 0.6312 | likely_pathogenic | 0.796 | pathogenic | -0.293 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | I |
V/E | 0.3534 | ambiguous | 0.4887 | ambiguous | -0.292 | Destabilizing | 0.997 | D | 0.533 | neutral | N | 0.280864608 | None | None | I |
V/F | 0.3222 | likely_benign | 0.452 | ambiguous | -0.691 | Destabilizing | 1.0 | D | 0.508 | neutral | None | None | None | None | I |
V/G | 0.3522 | ambiguous | 0.4863 | ambiguous | -1.337 | Destabilizing | 0.989 | D | 0.609 | neutral | N | 0.445512688 | None | None | I |
V/H | 0.698 | likely_pathogenic | 0.8152 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/I | 0.0954 | likely_benign | 0.0998 | benign | -0.321 | Destabilizing | 0.99 | D | 0.428 | neutral | None | None | None | None | I |
V/K | 0.4414 | ambiguous | 0.5723 | pathogenic | -0.765 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | I |
V/L | 0.3241 | likely_benign | 0.3983 | ambiguous | -0.321 | Destabilizing | 0.987 | D | 0.441 | neutral | N | 0.321118044 | None | None | I |
V/M | 0.2241 | likely_benign | 0.3065 | benign | -0.345 | Destabilizing | 0.999 | D | 0.495 | neutral | N | 0.35508346 | None | None | I |
V/N | 0.5194 | ambiguous | 0.6626 | pathogenic | -0.582 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/P | 0.6341 | likely_pathogenic | 0.7306 | pathogenic | -0.522 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | I |
V/Q | 0.403 | ambiguous | 0.5223 | ambiguous | -0.686 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
V/R | 0.3531 | ambiguous | 0.4719 | ambiguous | -0.347 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/S | 0.2367 | likely_benign | 0.3121 | benign | -1.18 | Destabilizing | 0.914 | D | 0.373 | neutral | None | None | None | None | I |
V/T | 0.1661 | likely_benign | 0.1993 | benign | -1.056 | Destabilizing | 0.983 | D | 0.431 | neutral | None | None | None | None | I |
V/W | 0.8925 | likely_pathogenic | 0.9522 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
V/Y | 0.7553 | likely_pathogenic | 0.8423 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.