Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4813 | 14662;14663;14664 | chr2:178736009;178736008;178736007 | chr2:179600736;179600735;179600734 |
N2AB | 4496 | 13711;13712;13713 | chr2:178736009;178736008;178736007 | chr2:179600736;179600735;179600734 |
N2A | 3569 | 10930;10931;10932 | chr2:178736009;178736008;178736007 | chr2:179600736;179600735;179600734 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.136 | N | 0.365 | 0.139 | 0.12205267543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | None | None | 0.012 | N | 0.336 | 0.075 | 0.173771789658 | gnomAD-4.0.0 | 1.5934E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88352E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4168 | ambiguous | 0.4386 | ambiguous | -0.526 | Destabilizing | 0.688 | D | 0.495 | neutral | None | None | None | None | N |
K/C | 0.7412 | likely_pathogenic | 0.7574 | pathogenic | -0.648 | Destabilizing | 0.998 | D | 0.512 | neutral | None | None | None | None | N |
K/D | 0.7169 | likely_pathogenic | 0.7597 | pathogenic | 0.007 | Stabilizing | 0.842 | D | 0.545 | neutral | None | None | None | None | N |
K/E | 0.2185 | likely_benign | 0.2561 | benign | 0.129 | Stabilizing | 0.454 | N | 0.56 | neutral | N | 0.446048418 | None | None | N |
K/F | 0.8605 | likely_pathogenic | 0.8729 | pathogenic | -0.216 | Destabilizing | 0.949 | D | 0.54 | neutral | None | None | None | None | N |
K/G | 0.6029 | likely_pathogenic | 0.6351 | pathogenic | -0.875 | Destabilizing | 0.915 | D | 0.527 | neutral | None | None | None | None | N |
K/H | 0.3441 | ambiguous | 0.3429 | ambiguous | -0.994 | Destabilizing | 0.974 | D | 0.548 | neutral | None | None | None | None | N |
K/I | 0.4028 | ambiguous | 0.4344 | ambiguous | 0.373 | Stabilizing | 0.728 | D | 0.521 | neutral | None | None | None | None | N |
K/L | 0.4666 | ambiguous | 0.5015 | ambiguous | 0.373 | Stabilizing | 0.016 | N | 0.405 | neutral | None | None | None | None | N |
K/M | 0.2936 | likely_benign | 0.328 | benign | 0.02 | Stabilizing | 0.934 | D | 0.559 | neutral | N | 0.445622501 | None | None | N |
K/N | 0.4556 | ambiguous | 0.5198 | ambiguous | -0.479 | Destabilizing | 0.801 | D | 0.545 | neutral | N | 0.443471533 | None | None | N |
K/P | 0.9187 | likely_pathogenic | 0.9309 | pathogenic | 0.103 | Stabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
K/Q | 0.1526 | likely_benign | 0.1582 | benign | -0.468 | Destabilizing | 0.136 | N | 0.365 | neutral | N | 0.443863423 | None | None | N |
K/R | 0.0845 | likely_benign | 0.0815 | benign | -0.429 | Destabilizing | 0.012 | N | 0.336 | neutral | N | 0.415302168 | None | None | N |
K/S | 0.4195 | ambiguous | 0.452 | ambiguous | -1.104 | Destabilizing | 0.842 | D | 0.535 | neutral | None | None | None | None | N |
K/T | 0.1559 | likely_benign | 0.1667 | benign | -0.772 | Destabilizing | 0.801 | D | 0.534 | neutral | N | 0.343323217 | None | None | N |
K/V | 0.3542 | ambiguous | 0.3638 | ambiguous | 0.103 | Stabilizing | 0.029 | N | 0.426 | neutral | None | None | None | None | N |
K/W | 0.8448 | likely_pathogenic | 0.8605 | pathogenic | -0.134 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
K/Y | 0.7043 | likely_pathogenic | 0.7418 | pathogenic | 0.154 | Stabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.