Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4815 | 14668;14669;14670 | chr2:178736003;178736002;178736001 | chr2:179600730;179600729;179600728 |
N2AB | 4498 | 13717;13718;13719 | chr2:178736003;178736002;178736001 | chr2:179600730;179600729;179600728 |
N2A | 3571 | 10936;10937;10938 | chr2:178736003;178736002;178736001 | chr2:179600730;179600729;179600728 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1284454958 | -1.058 | 0.029 | N | 0.337 | 0.139 | 0.404870348458 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1656 | likely_benign | 0.1812 | benign | -2.112 | Highly Destabilizing | 0.014 | N | 0.353 | neutral | None | None | None | None | I |
I/C | 0.3727 | ambiguous | 0.4745 | ambiguous | -1.307 | Destabilizing | 0.628 | D | 0.465 | neutral | None | None | None | None | I |
I/D | 0.4092 | ambiguous | 0.4921 | ambiguous | -1.586 | Destabilizing | 0.072 | N | 0.505 | neutral | None | None | None | None | I |
I/E | 0.2874 | likely_benign | 0.3422 | ambiguous | -1.521 | Destabilizing | 0.016 | N | 0.415 | neutral | None | None | None | None | I |
I/F | 0.1 | likely_benign | 0.119 | benign | -1.384 | Destabilizing | 0.029 | N | 0.337 | neutral | N | 0.510099179 | None | None | I |
I/G | 0.374 | ambiguous | 0.4387 | ambiguous | -2.515 | Highly Destabilizing | 0.072 | N | 0.464 | neutral | None | None | None | None | I |
I/H | 0.2016 | likely_benign | 0.2356 | benign | -1.697 | Destabilizing | None | N | 0.399 | neutral | None | None | None | None | I |
I/K | 0.234 | likely_benign | 0.2815 | benign | -1.523 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | I |
I/L | 0.0512 | likely_benign | 0.0579 | benign | -1.035 | Destabilizing | None | N | 0.17 | neutral | N | 0.503852014 | None | None | I |
I/M | 0.0813 | likely_benign | 0.0907 | benign | -0.8 | Destabilizing | 0.093 | N | 0.452 | neutral | N | 0.504371629 | None | None | I |
I/N | 0.1474 | likely_benign | 0.1633 | benign | -1.409 | Destabilizing | 0.055 | N | 0.5 | neutral | N | 0.465536795 | None | None | I |
I/P | 0.5518 | ambiguous | 0.6274 | pathogenic | -1.366 | Destabilizing | 0.136 | N | 0.561 | neutral | None | None | None | None | I |
I/Q | 0.1776 | likely_benign | 0.1999 | benign | -1.518 | Destabilizing | None | N | 0.451 | neutral | None | None | None | None | I |
I/R | 0.1495 | likely_benign | 0.1874 | benign | -0.95 | Destabilizing | 0.038 | N | 0.505 | neutral | None | None | None | None | I |
I/S | 0.1346 | likely_benign | 0.1425 | benign | -2.107 | Highly Destabilizing | 0.024 | N | 0.415 | neutral | N | 0.392261002 | None | None | I |
I/T | 0.1187 | likely_benign | 0.1249 | benign | -1.917 | Destabilizing | 0.024 | N | 0.362 | neutral | N | 0.419625238 | None | None | I |
I/V | 0.0789 | likely_benign | 0.0805 | benign | -1.366 | Destabilizing | 0.005 | N | 0.271 | neutral | N | 0.497822157 | None | None | I |
I/W | 0.419 | ambiguous | 0.5658 | pathogenic | -1.515 | Destabilizing | 0.864 | D | 0.495 | neutral | None | None | None | None | I |
I/Y | 0.253 | likely_benign | 0.3168 | benign | -1.302 | Destabilizing | 0.072 | N | 0.451 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.