Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4817 | 14674;14675;14676 | chr2:178735997;178735996;178735995 | chr2:179600724;179600723;179600722 |
N2AB | 4500 | 13723;13724;13725 | chr2:178735997;178735996;178735995 | chr2:179600724;179600723;179600722 |
N2A | 3573 | 10942;10943;10944 | chr2:178735997;178735996;178735995 | chr2:179600724;179600723;179600722 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1299461448 | -0.087 | 0.669 | N | 0.481 | 0.34 | 0.436455679973 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
T/I | rs1299461448 | -0.087 | 0.669 | N | 0.481 | 0.34 | 0.436455679973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1299461448 | -0.087 | 0.669 | N | 0.481 | 0.34 | 0.436455679973 | gnomAD-4.0.0 | 2.56314E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1076 | likely_benign | 0.0934 | benign | -0.944 | Destabilizing | 0.454 | N | 0.337 | neutral | N | 0.490434602 | None | None | N |
T/C | 0.537 | ambiguous | 0.4757 | ambiguous | -0.751 | Destabilizing | 0.998 | D | 0.501 | neutral | None | None | None | None | N |
T/D | 0.5324 | ambiguous | 0.4594 | ambiguous | -1.495 | Destabilizing | 0.728 | D | 0.483 | neutral | None | None | None | None | N |
T/E | 0.3806 | ambiguous | 0.3358 | benign | -1.392 | Destabilizing | 0.067 | N | 0.283 | neutral | None | None | None | None | N |
T/F | 0.3075 | likely_benign | 0.2608 | benign | -0.816 | Destabilizing | 0.974 | D | 0.561 | neutral | None | None | None | None | N |
T/G | 0.3771 | ambiguous | 0.3115 | benign | -1.288 | Destabilizing | 0.728 | D | 0.519 | neutral | None | None | None | None | N |
T/H | 0.3073 | likely_benign | 0.2728 | benign | -1.581 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | N |
T/I | 0.2233 | likely_benign | 0.1944 | benign | -0.081 | Destabilizing | 0.669 | D | 0.481 | neutral | N | 0.470626642 | None | None | N |
T/K | 0.2833 | likely_benign | 0.2452 | benign | -0.8 | Destabilizing | 0.801 | D | 0.478 | neutral | N | 0.463548433 | None | None | N |
T/L | 0.1374 | likely_benign | 0.1167 | benign | -0.081 | Destabilizing | 0.525 | D | 0.458 | neutral | None | None | None | None | N |
T/M | 0.0999 | likely_benign | 0.0944 | benign | 0.191 | Stabilizing | 0.974 | D | 0.515 | neutral | None | None | None | None | N |
T/N | 0.1779 | likely_benign | 0.1531 | benign | -1.232 | Destabilizing | 0.842 | D | 0.473 | neutral | None | None | None | None | N |
T/P | 0.4673 | ambiguous | 0.3521 | ambiguous | -0.336 | Destabilizing | 0.966 | D | 0.521 | neutral | N | 0.504591376 | None | None | N |
T/Q | 0.2798 | likely_benign | 0.2528 | benign | -1.251 | Destabilizing | 0.949 | D | 0.533 | neutral | None | None | None | None | N |
T/R | 0.2111 | likely_benign | 0.1803 | benign | -0.749 | Destabilizing | 0.934 | D | 0.533 | neutral | N | 0.453540635 | None | None | N |
T/S | 0.1349 | likely_benign | 0.1152 | benign | -1.369 | Destabilizing | 0.022 | N | 0.169 | neutral | N | 0.467053332 | None | None | N |
T/V | 0.1724 | likely_benign | 0.1478 | benign | -0.336 | Destabilizing | 0.029 | N | 0.162 | neutral | None | None | None | None | N |
T/W | 0.6805 | likely_pathogenic | 0.6307 | pathogenic | -0.914 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
T/Y | 0.3716 | ambiguous | 0.3094 | benign | -0.581 | Destabilizing | 0.991 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.