Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4821 | 14686;14687;14688 | chr2:178735985;178735984;178735983 | chr2:179600712;179600711;179600710 |
N2AB | 4504 | 13735;13736;13737 | chr2:178735985;178735984;178735983 | chr2:179600712;179600711;179600710 |
N2A | 3577 | 10954;10955;10956 | chr2:178735985;178735984;178735983 | chr2:179600712;179600711;179600710 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1358712791 | None | 0.994 | N | 0.486 | 0.478 | 0.723311353475 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1358712791 | None | 0.994 | N | 0.486 | 0.478 | 0.723311353475 | gnomAD-4.0.0 | 6.57013E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46959E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1534 | likely_benign | 0.1662 | benign | -0.637 | Destabilizing | 0.835 | D | 0.44 | neutral | N | 0.482615575 | None | None | I |
T/C | 0.6486 | likely_pathogenic | 0.6849 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | I |
T/D | 0.5247 | ambiguous | 0.6023 | pathogenic | 0.135 | Stabilizing | 0.97 | D | 0.504 | neutral | None | None | None | None | I |
T/E | 0.465 | ambiguous | 0.5294 | ambiguous | 0.134 | Stabilizing | 0.97 | D | 0.519 | neutral | None | None | None | None | I |
T/F | 0.2762 | likely_benign | 0.3469 | ambiguous | -0.857 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
T/G | 0.4611 | ambiguous | 0.5026 | ambiguous | -0.853 | Destabilizing | 0.97 | D | 0.585 | neutral | None | None | None | None | I |
T/H | 0.3314 | likely_benign | 0.3805 | ambiguous | -0.963 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
T/I | 0.2527 | likely_benign | 0.2917 | benign | -0.159 | Destabilizing | 0.994 | D | 0.486 | neutral | N | 0.400227618 | None | None | I |
T/K | 0.2913 | likely_benign | 0.3614 | ambiguous | -0.516 | Destabilizing | 0.97 | D | 0.508 | neutral | None | None | None | None | I |
T/L | 0.1597 | likely_benign | 0.1691 | benign | -0.159 | Destabilizing | 0.985 | D | 0.491 | neutral | None | None | None | None | I |
T/M | 0.1112 | likely_benign | 0.1129 | benign | -0.219 | Destabilizing | 1.0 | D | 0.509 | neutral | None | None | None | None | I |
T/N | 0.1456 | likely_benign | 0.1757 | benign | -0.432 | Destabilizing | 0.961 | D | 0.487 | neutral | N | 0.448261878 | None | None | I |
T/P | 0.4404 | ambiguous | 0.4765 | ambiguous | -0.287 | Destabilizing | 0.994 | D | 0.488 | neutral | N | 0.512215485 | None | None | I |
T/Q | 0.3098 | likely_benign | 0.3665 | ambiguous | -0.505 | Destabilizing | 0.996 | D | 0.501 | neutral | None | None | None | None | I |
T/R | 0.2687 | likely_benign | 0.3329 | benign | -0.297 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | I |
T/S | 0.1218 | likely_benign | 0.1481 | benign | -0.693 | Destabilizing | 0.287 | N | 0.221 | neutral | N | 0.454939649 | None | None | I |
T/V | 0.2253 | likely_benign | 0.2481 | benign | -0.287 | Destabilizing | 0.985 | D | 0.45 | neutral | None | None | None | None | I |
T/W | 0.6648 | likely_pathogenic | 0.7354 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
T/Y | 0.3037 | likely_benign | 0.3728 | ambiguous | -0.607 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.