Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4823 | 14692;14693;14694 | chr2:178735979;178735978;178735977 | chr2:179600706;179600705;179600704 |
N2AB | 4506 | 13741;13742;13743 | chr2:178735979;178735978;178735977 | chr2:179600706;179600705;179600704 |
N2A | 3579 | 10960;10961;10962 | chr2:178735979;178735978;178735977 | chr2:179600706;179600705;179600704 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.484 | N | 0.329 | 0.119 | 0.398133443147 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1179 | likely_benign | 0.0997 | benign | -0.497 | Destabilizing | 0.027 | N | 0.33 | neutral | N | 0.505152573 | None | None | I |
V/C | 0.7189 | likely_pathogenic | 0.6436 | pathogenic | -0.716 | Destabilizing | 0.824 | D | 0.382 | neutral | None | None | None | None | I |
V/D | 0.2086 | likely_benign | 0.1703 | benign | -0.482 | Destabilizing | 0.149 | N | 0.463 | neutral | None | None | None | None | I |
V/E | 0.1916 | likely_benign | 0.1506 | benign | -0.591 | Destabilizing | 0.117 | N | 0.459 | neutral | N | 0.476574525 | None | None | I |
V/F | 0.1329 | likely_benign | 0.1248 | benign | -0.705 | Destabilizing | 0.555 | D | 0.361 | neutral | None | None | None | None | I |
V/G | 0.1663 | likely_benign | 0.133 | benign | -0.616 | Destabilizing | 0.117 | N | 0.455 | neutral | D | 0.601678815 | None | None | I |
V/H | 0.4191 | ambiguous | 0.361 | ambiguous | -0.14 | Destabilizing | 0.935 | D | 0.452 | neutral | None | None | None | None | I |
V/I | 0.0767 | likely_benign | 0.0739 | benign | -0.326 | Destabilizing | 0.081 | N | 0.331 | neutral | None | None | None | None | I |
V/K | 0.2231 | likely_benign | 0.169 | benign | -0.56 | Destabilizing | 0.149 | N | 0.457 | neutral | None | None | None | None | I |
V/L | 0.1347 | likely_benign | 0.1177 | benign | -0.326 | Destabilizing | 0.027 | N | 0.348 | neutral | N | 0.49697326 | None | None | I |
V/M | 0.1093 | likely_benign | 0.0982 | benign | -0.498 | Destabilizing | 0.484 | N | 0.329 | neutral | N | 0.510030713 | None | None | I |
V/N | 0.1533 | likely_benign | 0.1329 | benign | -0.329 | Destabilizing | 0.38 | N | 0.465 | neutral | None | None | None | None | I |
V/P | 0.2937 | likely_benign | 0.2436 | benign | -0.35 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | I |
V/Q | 0.2214 | likely_benign | 0.1768 | benign | -0.565 | Destabilizing | 0.555 | D | 0.456 | neutral | None | None | None | None | I |
V/R | 0.2028 | likely_benign | 0.1606 | benign | -0.023 | Destabilizing | 0.38 | N | 0.467 | neutral | None | None | None | None | I |
V/S | 0.1357 | likely_benign | 0.1168 | benign | -0.646 | Destabilizing | 0.081 | N | 0.443 | neutral | None | None | None | None | I |
V/T | 0.1224 | likely_benign | 0.1028 | benign | -0.658 | Destabilizing | 0.001 | N | 0.19 | neutral | None | None | None | None | I |
V/W | 0.757 | likely_pathogenic | 0.6869 | pathogenic | -0.781 | Destabilizing | 0.935 | D | 0.545 | neutral | None | None | None | None | I |
V/Y | 0.4427 | ambiguous | 0.3918 | ambiguous | -0.502 | Destabilizing | 0.555 | D | 0.359 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.