Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4827 | 14704;14705;14706 | chr2:178735967;178735966;178735965 | chr2:179600694;179600693;179600692 |
N2AB | 4510 | 13753;13754;13755 | chr2:178735967;178735966;178735965 | chr2:179600694;179600693;179600692 |
N2A | 3583 | 10972;10973;10974 | chr2:178735967;178735966;178735965 | chr2:179600694;179600693;179600692 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.655 | N | 0.603 | 0.263 | 0.767856249327 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52042E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/T | None | None | 0.003 | N | 0.278 | 0.205 | 0.583677480531 | gnomAD-4.0.0 | 6.84205E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99457E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3056 | likely_benign | 0.2121 | benign | -1.281 | Destabilizing | 0.001 | N | 0.291 | neutral | None | None | None | None | I |
I/C | 0.7089 | likely_pathogenic | 0.5913 | pathogenic | -0.52 | Destabilizing | 0.94 | D | 0.545 | neutral | None | None | None | None | I |
I/D | 0.6721 | likely_pathogenic | 0.5203 | ambiguous | -0.858 | Destabilizing | 0.418 | N | 0.591 | neutral | None | None | None | None | I |
I/E | 0.5035 | ambiguous | 0.394 | ambiguous | -0.913 | Destabilizing | 0.418 | N | 0.559 | neutral | None | None | None | None | I |
I/F | 0.1904 | likely_benign | 0.1376 | benign | -1.067 | Destabilizing | 0.351 | N | 0.517 | neutral | N | 0.50845784 | None | None | I |
I/G | 0.6333 | likely_pathogenic | 0.4818 | ambiguous | -1.541 | Destabilizing | 0.264 | N | 0.528 | neutral | None | None | None | None | I |
I/H | 0.447 | ambiguous | 0.3416 | ambiguous | -0.833 | Destabilizing | 0.983 | D | 0.529 | neutral | None | None | None | None | I |
I/K | 0.3505 | ambiguous | 0.2601 | benign | -0.742 | Destabilizing | 0.418 | N | 0.559 | neutral | None | None | None | None | I |
I/L | 0.1299 | likely_benign | 0.1089 | benign | -0.669 | Destabilizing | 0.021 | N | 0.319 | neutral | N | 0.499318899 | None | None | I |
I/M | 0.1282 | likely_benign | 0.1061 | benign | -0.387 | Destabilizing | 0.655 | D | 0.527 | neutral | N | 0.505400675 | None | None | I |
I/N | 0.2391 | likely_benign | 0.178 | benign | -0.397 | Destabilizing | 0.655 | D | 0.603 | neutral | N | 0.507612107 | None | None | I |
I/P | 0.9434 | likely_pathogenic | 0.9004 | pathogenic | -0.84 | Destabilizing | 0.593 | D | 0.612 | neutral | None | None | None | None | I |
I/Q | 0.3945 | ambiguous | 0.3016 | benign | -0.653 | Destabilizing | 0.836 | D | 0.562 | neutral | None | None | None | None | I |
I/R | 0.2506 | likely_benign | 0.1845 | benign | -0.112 | Destabilizing | 0.836 | D | 0.591 | neutral | None | None | None | None | I |
I/S | 0.2358 | likely_benign | 0.1761 | benign | -0.898 | Destabilizing | 0.101 | N | 0.499 | neutral | N | 0.471788824 | None | None | I |
I/T | 0.1845 | likely_benign | 0.1391 | benign | -0.846 | Destabilizing | 0.003 | N | 0.278 | neutral | N | 0.455487255 | None | None | I |
I/V | 0.0766 | likely_benign | 0.0667 | benign | -0.84 | Destabilizing | None | N | 0.185 | neutral | N | 0.485126855 | None | None | I |
I/W | 0.8169 | likely_pathogenic | 0.7265 | pathogenic | -1.109 | Destabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | I |
I/Y | 0.5127 | ambiguous | 0.408 | ambiguous | -0.885 | Destabilizing | 0.836 | D | 0.595 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.