Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4834 | 14725;14726;14727 | chr2:178735946;178735945;178735944 | chr2:179600673;179600672;179600671 |
N2AB | 4517 | 13774;13775;13776 | chr2:178735946;178735945;178735944 | chr2:179600673;179600672;179600671 |
N2A | 3590 | 10993;10994;10995 | chr2:178735946;178735945;178735944 | chr2:179600673;179600672;179600671 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs746792103 | -0.113 | 0.565 | N | 0.477 | 0.077 | 0.17948927462 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
A/S | rs746792103 | -0.113 | 0.565 | N | 0.477 | 0.077 | 0.17948927462 | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52029E-05 | None | 0 | 0 | 8.9946E-07 | 0 | 0 |
A/T | None | None | 0.008 | N | 0.211 | 0.063 | 0.15556083564 | gnomAD-4.0.0 | 6.84197E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4942 | ambiguous | 0.4345 | ambiguous | -0.78 | Destabilizing | 0.989 | D | 0.531 | neutral | None | None | None | None | N |
A/D | 0.2221 | likely_benign | 0.1857 | benign | -0.337 | Destabilizing | 0.024 | N | 0.346 | neutral | None | None | None | None | N |
A/E | 0.1832 | likely_benign | 0.1624 | benign | -0.48 | Destabilizing | 0.565 | D | 0.524 | neutral | N | 0.486096908 | None | None | N |
A/F | 0.2326 | likely_benign | 0.2007 | benign | -0.834 | Destabilizing | 0.923 | D | 0.692 | prob.neutral | None | None | None | None | N |
A/G | 0.1538 | likely_benign | 0.1374 | benign | -0.339 | Destabilizing | 0.722 | D | 0.451 | neutral | D | 0.575650028 | None | None | N |
A/H | 0.3956 | ambiguous | 0.3402 | ambiguous | -0.367 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/I | 0.1487 | likely_benign | 0.1253 | benign | -0.295 | Destabilizing | 0.372 | N | 0.517 | neutral | None | None | None | None | N |
A/K | 0.3194 | likely_benign | 0.2711 | benign | -0.637 | Destabilizing | 0.923 | D | 0.523 | neutral | None | None | None | None | N |
A/L | 0.1324 | likely_benign | 0.1152 | benign | -0.295 | Destabilizing | 0.633 | D | 0.5 | neutral | None | None | None | None | N |
A/M | 0.1954 | likely_benign | 0.1631 | benign | -0.402 | Destabilizing | 0.979 | D | 0.621 | neutral | None | None | None | None | N |
A/N | 0.2009 | likely_benign | 0.1699 | benign | -0.325 | Destabilizing | 0.923 | D | 0.664 | neutral | None | None | None | None | N |
A/P | 0.116 | likely_benign | 0.1034 | benign | -0.254 | Destabilizing | 0.949 | D | 0.603 | neutral | N | 0.438733132 | None | None | N |
A/Q | 0.2598 | likely_benign | 0.2276 | benign | -0.576 | Destabilizing | 0.961 | D | 0.621 | neutral | None | None | None | None | N |
A/R | 0.2914 | likely_benign | 0.2605 | benign | -0.203 | Destabilizing | 0.923 | D | 0.617 | neutral | None | None | None | None | N |
A/S | 0.0889 | likely_benign | 0.0845 | benign | -0.554 | Destabilizing | 0.565 | D | 0.477 | neutral | N | 0.504404477 | None | None | N |
A/T | 0.0805 | likely_benign | 0.0744 | benign | -0.611 | Destabilizing | 0.008 | N | 0.211 | neutral | N | 0.498425312 | None | None | N |
A/V | 0.0908 | likely_benign | 0.0825 | benign | -0.254 | Destabilizing | 0.008 | N | 0.279 | neutral | N | 0.509093356 | None | None | N |
A/W | 0.66 | likely_pathogenic | 0.5815 | pathogenic | -0.989 | Destabilizing | 0.996 | D | 0.744 | deleterious | None | None | None | None | N |
A/Y | 0.3957 | ambiguous | 0.3244 | benign | -0.633 | Destabilizing | 0.961 | D | 0.686 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.