Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4835 | 14728;14729;14730 | chr2:178735943;178735942;178735941 | chr2:179600670;179600669;179600668 |
N2AB | 4518 | 13777;13778;13779 | chr2:178735943;178735942;178735941 | chr2:179600670;179600669;179600668 |
N2A | 3591 | 10996;10997;10998 | chr2:178735943;178735942;178735941 | chr2:179600670;179600669;179600668 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.896 | D | 0.549 | 0.615 | 0.8332244366 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5071 | ambiguous | 0.4593 | ambiguous | -2.065 | Highly Destabilizing | 0.25 | N | 0.441 | neutral | None | None | None | None | N |
L/C | 0.6804 | likely_pathogenic | 0.6437 | pathogenic | -1.395 | Destabilizing | 0.977 | D | 0.504 | neutral | None | None | None | None | N |
L/D | 0.9345 | likely_pathogenic | 0.9232 | pathogenic | -1.61 | Destabilizing | 0.005 | N | 0.41 | neutral | None | None | None | None | N |
L/E | 0.7455 | likely_pathogenic | 0.706 | pathogenic | -1.404 | Destabilizing | 0.447 | N | 0.551 | neutral | None | None | None | None | N |
L/F | 0.1947 | likely_benign | 0.1726 | benign | -1.233 | Destabilizing | 0.81 | D | 0.501 | neutral | D | 0.60952903 | None | None | N |
L/G | 0.8168 | likely_pathogenic | 0.7789 | pathogenic | -2.55 | Highly Destabilizing | 0.766 | D | 0.535 | neutral | None | None | None | None | N |
L/H | 0.5732 | likely_pathogenic | 0.5355 | ambiguous | -1.732 | Destabilizing | 0.99 | D | 0.567 | neutral | D | 0.753109507 | None | None | N |
L/I | 0.0757 | likely_benign | 0.0728 | benign | -0.688 | Destabilizing | 0.001 | N | 0.1 | neutral | N | 0.47291378 | None | None | N |
L/K | 0.622 | likely_pathogenic | 0.5775 | pathogenic | -1.385 | Destabilizing | 0.92 | D | 0.519 | neutral | None | None | None | None | N |
L/M | 0.1913 | likely_benign | 0.1684 | benign | -0.717 | Destabilizing | 0.85 | D | 0.539 | neutral | None | None | None | None | N |
L/N | 0.7723 | likely_pathogenic | 0.7369 | pathogenic | -1.67 | Destabilizing | 0.85 | D | 0.563 | neutral | None | None | None | None | N |
L/P | 0.6462 | likely_pathogenic | 0.5954 | pathogenic | -1.126 | Destabilizing | 0.963 | D | 0.573 | neutral | D | 0.638081705 | None | None | N |
L/Q | 0.4784 | ambiguous | 0.4284 | ambiguous | -1.509 | Destabilizing | 0.92 | D | 0.554 | neutral | None | None | None | None | N |
L/R | 0.4815 | ambiguous | 0.4331 | ambiguous | -1.217 | Destabilizing | 0.896 | D | 0.549 | neutral | D | 0.71572492 | None | None | N |
L/S | 0.6547 | likely_pathogenic | 0.616 | pathogenic | -2.415 | Highly Destabilizing | 0.617 | D | 0.494 | neutral | None | None | None | None | N |
L/T | 0.5208 | ambiguous | 0.487 | ambiguous | -2.047 | Highly Destabilizing | 0.617 | D | 0.455 | neutral | None | None | None | None | N |
L/V | 0.1017 | likely_benign | 0.0934 | benign | -1.126 | Destabilizing | 0.002 | N | 0.15 | neutral | N | 0.521089063 | None | None | N |
L/W | 0.5114 | ambiguous | 0.4748 | ambiguous | -1.406 | Destabilizing | 0.992 | D | 0.546 | neutral | None | None | None | None | N |
L/Y | 0.5718 | likely_pathogenic | 0.5211 | ambiguous | -1.133 | Destabilizing | 0.92 | D | 0.542 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.