Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4843 | 14752;14753;14754 | chr2:178735919;178735918;178735917 | chr2:179600646;179600645;179600644 |
N2AB | 4526 | 13801;13802;13803 | chr2:178735919;178735918;178735917 | chr2:179600646;179600645;179600644 |
N2A | 3599 | 11020;11021;11022 | chr2:178735919;178735918;178735917 | chr2:179600646;179600645;179600644 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1401764178 | -2.07 | 0.062 | N | 0.501 | 0.379 | 0.663598450264 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs1401764178 | -2.07 | 0.062 | N | 0.501 | 0.379 | 0.663598450264 | gnomAD-4.0.0 | 4.77327E-06 | None | None | None | None | N | None | 0 | 6.85965E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5177 | ambiguous | 0.4173 | ambiguous | -1.966 | Destabilizing | 0.035 | N | 0.427 | neutral | None | None | None | None | N |
I/C | 0.6908 | likely_pathogenic | 0.6278 | pathogenic | -0.999 | Destabilizing | 0.824 | D | 0.569 | neutral | None | None | None | None | N |
I/D | 0.7679 | likely_pathogenic | 0.6912 | pathogenic | -1.63 | Destabilizing | 0.081 | N | 0.603 | neutral | None | None | None | None | N |
I/E | 0.6247 | likely_pathogenic | 0.5501 | ambiguous | -1.556 | Destabilizing | 0.002 | N | 0.443 | neutral | None | None | None | None | N |
I/F | 0.1486 | likely_benign | 0.1222 | benign | -1.298 | Destabilizing | 0.317 | N | 0.527 | neutral | N | 0.402503794 | None | None | N |
I/G | 0.7106 | likely_pathogenic | 0.6239 | pathogenic | -2.359 | Highly Destabilizing | 0.262 | N | 0.605 | neutral | None | None | None | None | N |
I/H | 0.5201 | ambiguous | 0.4341 | ambiguous | -1.592 | Destabilizing | 0.935 | D | 0.601 | neutral | None | None | None | None | N |
I/K | 0.3995 | ambiguous | 0.3222 | benign | -1.368 | Destabilizing | 0.149 | N | 0.605 | neutral | None | None | None | None | N |
I/L | 0.1372 | likely_benign | 0.1139 | benign | -0.909 | Destabilizing | 0.004 | N | 0.235 | neutral | N | 0.471739989 | None | None | N |
I/M | 0.1368 | likely_benign | 0.1155 | benign | -0.643 | Destabilizing | 0.005 | N | 0.165 | neutral | N | 0.493137865 | None | None | N |
I/N | 0.3179 | likely_benign | 0.2494 | benign | -1.248 | Destabilizing | 0.484 | N | 0.627 | neutral | D | 0.552865504 | None | None | N |
I/P | 0.7689 | likely_pathogenic | 0.7077 | pathogenic | -1.234 | Destabilizing | 0.791 | D | 0.629 | neutral | None | None | None | None | N |
I/Q | 0.4664 | ambiguous | 0.3853 | ambiguous | -1.339 | Destabilizing | 0.38 | N | 0.634 | neutral | None | None | None | None | N |
I/R | 0.3368 | likely_benign | 0.2665 | benign | -0.851 | Destabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | N |
I/S | 0.4075 | ambiguous | 0.3173 | benign | -1.859 | Destabilizing | 0.117 | N | 0.537 | neutral | N | 0.51571115 | None | None | N |
I/T | 0.4064 | ambiguous | 0.3259 | benign | -1.659 | Destabilizing | 0.062 | N | 0.501 | neutral | N | 0.507813405 | None | None | N |
I/V | 0.1139 | likely_benign | 0.1012 | benign | -1.234 | Destabilizing | None | N | 0.133 | neutral | N | 0.482130136 | None | None | N |
I/W | 0.7317 | likely_pathogenic | 0.6709 | pathogenic | -1.464 | Destabilizing | 0.935 | D | 0.627 | neutral | None | None | None | None | N |
I/Y | 0.4321 | ambiguous | 0.3663 | ambiguous | -1.228 | Destabilizing | 0.555 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.