Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4850 | 14773;14774;14775 | chr2:178735898;178735897;178735896 | chr2:179600625;179600624;179600623 |
N2AB | 4533 | 13822;13823;13824 | chr2:178735898;178735897;178735896 | chr2:179600625;179600624;179600623 |
N2A | 3606 | 11041;11042;11043 | chr2:178735898;178735897;178735896 | chr2:179600625;179600624;179600623 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | rs760092355 | -0.521 | 0.92 | N | 0.756 | 0.29 | 0.318828661733 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/L | rs760092355 | -0.521 | 0.92 | N | 0.756 | 0.29 | 0.318828661733 | gnomAD-4.0.0 | 2.73675E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63725E-05 | 0 |
H/R | None | None | 0.959 | N | 0.738 | 0.323 | 0.195762928549 | gnomAD-4.0.0 | 1.36838E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31863E-05 | 0 |
H/Y | None | None | 0.061 | N | 0.356 | 0.284 | 0.136095386433 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6513 | likely_pathogenic | 0.559 | ambiguous | -1.345 | Destabilizing | 0.863 | D | 0.751 | deleterious | None | None | None | None | N |
H/C | 0.3289 | likely_benign | 0.2738 | benign | -0.764 | Destabilizing | 0.046 | N | 0.739 | prob.delet. | None | None | None | None | N |
H/D | 0.7341 | likely_pathogenic | 0.6446 | pathogenic | -1.265 | Destabilizing | 0.986 | D | 0.765 | deleterious | N | 0.451338306 | None | None | N |
H/E | 0.77 | likely_pathogenic | 0.6606 | pathogenic | -1.122 | Destabilizing | 0.99 | D | 0.699 | prob.neutral | None | None | None | None | N |
H/F | 0.5441 | ambiguous | 0.4578 | ambiguous | 0.149 | Stabilizing | 0.884 | D | 0.747 | deleterious | None | None | None | None | N |
H/G | 0.7116 | likely_pathogenic | 0.6251 | pathogenic | -1.73 | Destabilizing | 0.969 | D | 0.755 | deleterious | None | None | None | None | N |
H/I | 0.6521 | likely_pathogenic | 0.5383 | ambiguous | -0.243 | Destabilizing | 0.969 | D | 0.807 | deleterious | None | None | None | None | N |
H/K | 0.607 | likely_pathogenic | 0.4779 | ambiguous | -1.069 | Destabilizing | 0.969 | D | 0.754 | deleterious | None | None | None | None | N |
H/L | 0.3419 | ambiguous | 0.2668 | benign | -0.243 | Destabilizing | 0.92 | D | 0.756 | deleterious | N | 0.447529795 | None | None | N |
H/M | 0.766 | likely_pathogenic | 0.6827 | pathogenic | -0.461 | Destabilizing | 0.997 | D | 0.742 | deleterious | None | None | None | None | N |
H/N | 0.2836 | likely_benign | 0.2266 | benign | -1.37 | Destabilizing | 0.986 | D | 0.707 | prob.neutral | N | 0.453458555 | None | None | N |
H/P | 0.8208 | likely_pathogenic | 0.689 | pathogenic | -0.595 | Destabilizing | 0.996 | D | 0.775 | deleterious | N | 0.44018006 | None | None | N |
H/Q | 0.457 | ambiguous | 0.3414 | ambiguous | -1.024 | Destabilizing | 0.996 | D | 0.749 | deleterious | N | 0.450521399 | None | None | N |
H/R | 0.296 | likely_benign | 0.2037 | benign | -1.349 | Destabilizing | 0.959 | D | 0.738 | prob.delet. | N | 0.450896776 | None | None | N |
H/S | 0.5656 | likely_pathogenic | 0.4866 | ambiguous | -1.487 | Destabilizing | 0.969 | D | 0.749 | deleterious | None | None | None | None | N |
H/T | 0.661 | likely_pathogenic | 0.5508 | ambiguous | -1.238 | Destabilizing | 0.969 | D | 0.753 | deleterious | None | None | None | None | N |
H/V | 0.5804 | likely_pathogenic | 0.4642 | ambiguous | -0.595 | Destabilizing | 0.939 | D | 0.772 | deleterious | None | None | None | None | N |
H/W | 0.6857 | likely_pathogenic | 0.5985 | pathogenic | 0.489 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
H/Y | 0.1659 | likely_benign | 0.1358 | benign | 0.506 | Stabilizing | 0.061 | N | 0.356 | neutral | N | 0.423630029 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.