Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4856 | 14791;14792;14793 | chr2:178735880;178735879;178735878 | chr2:179600607;179600606;179600605 |
N2AB | 4539 | 13840;13841;13842 | chr2:178735880;178735879;178735878 | chr2:179600607;179600606;179600605 |
N2A | 3612 | 11059;11060;11061 | chr2:178735880;178735879;178735878 | chr2:179600607;179600606;179600605 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.27 | N | 0.229 | 0.103 | 0.0551355673512 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85796E-06 | 0 | 0 |
N/S | None | None | 0.065 | N | 0.134 | 0.122 | 0.124217242631 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2299 | likely_benign | 0.1664 | benign | -0.35 | Destabilizing | 0.329 | N | 0.345 | neutral | None | None | None | None | N |
N/C | 0.3121 | likely_benign | 0.2366 | benign | 0.423 | Stabilizing | 0.017 | N | 0.271 | neutral | None | None | None | None | N |
N/D | 0.1197 | likely_benign | 0.0919 | benign | 0.054 | Stabilizing | 0.642 | D | 0.223 | neutral | N | 0.346238992 | None | None | N |
N/E | 0.3528 | ambiguous | 0.2564 | benign | 0.003 | Stabilizing | 0.329 | N | 0.218 | neutral | None | None | None | None | N |
N/F | 0.5109 | ambiguous | 0.3776 | ambiguous | -0.794 | Destabilizing | 0.893 | D | 0.417 | neutral | None | None | None | None | N |
N/G | 0.2361 | likely_benign | 0.1862 | benign | -0.496 | Destabilizing | 0.495 | N | 0.225 | neutral | None | None | None | None | N |
N/H | 0.1004 | likely_benign | 0.0857 | benign | -0.586 | Destabilizing | 0.927 | D | 0.329 | neutral | N | 0.370354707 | None | None | N |
N/I | 0.3218 | likely_benign | 0.2356 | benign | -0.056 | Destabilizing | 0.473 | N | 0.431 | neutral | N | 0.437917218 | None | None | N |
N/K | 0.2545 | likely_benign | 0.1903 | benign | 0.2 | Stabilizing | 0.27 | N | 0.229 | neutral | N | 0.329601975 | None | None | N |
N/L | 0.2704 | likely_benign | 0.2 | benign | -0.056 | Destabilizing | 0.007 | N | 0.253 | neutral | None | None | None | None | N |
N/M | 0.4127 | ambiguous | 0.3167 | benign | 0.424 | Stabilizing | 0.893 | D | 0.396 | neutral | None | None | None | None | N |
N/P | 0.6595 | likely_pathogenic | 0.5789 | pathogenic | -0.129 | Destabilizing | 0.944 | D | 0.434 | neutral | None | None | None | None | N |
N/Q | 0.3079 | likely_benign | 0.2334 | benign | -0.269 | Destabilizing | 0.085 | N | 0.235 | neutral | None | None | None | None | N |
N/R | 0.2571 | likely_benign | 0.2003 | benign | 0.285 | Stabilizing | 0.007 | N | 0.213 | neutral | None | None | None | None | N |
N/S | 0.085 | likely_benign | 0.0767 | benign | 0.004 | Stabilizing | 0.065 | N | 0.134 | neutral | N | 0.337557114 | None | None | N |
N/T | 0.1867 | likely_benign | 0.1463 | benign | 0.085 | Stabilizing | 0.27 | N | 0.219 | neutral | N | 0.403085728 | None | None | N |
N/V | 0.3039 | likely_benign | 0.2216 | benign | -0.129 | Destabilizing | 0.543 | D | 0.431 | neutral | None | None | None | None | N |
N/W | 0.7867 | likely_pathogenic | 0.683 | pathogenic | -0.775 | Destabilizing | 0.995 | D | 0.417 | neutral | None | None | None | None | N |
N/Y | 0.1651 | likely_benign | 0.1281 | benign | -0.502 | Destabilizing | 0.927 | D | 0.395 | neutral | N | 0.422279857 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.