Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4858 | 14797;14798;14799 | chr2:178735874;178735873;178735872 | chr2:179600601;179600600;179600599 |
N2AB | 4541 | 13846;13847;13848 | chr2:178735874;178735873;178735872 | chr2:179600601;179600600;179600599 |
N2A | 3614 | 11065;11066;11067 | chr2:178735874;178735873;178735872 | chr2:179600601;179600600;179600599 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2081354978 | None | 0.023 | N | 0.121 | 0.071 | 0.251639045875 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | I | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1105 | likely_benign | 0.0994 | benign | -0.74 | Destabilizing | 0.01 | N | 0.094 | neutral | N | 0.501928201 | None | None | I |
T/C | 0.5126 | ambiguous | 0.4403 | ambiguous | -0.374 | Destabilizing | 0.995 | D | 0.413 | neutral | None | None | None | None | I |
T/D | 0.3355 | likely_benign | 0.2815 | benign | 0.056 | Stabilizing | 0.329 | N | 0.425 | neutral | None | None | None | None | I |
T/E | 0.2992 | likely_benign | 0.2571 | benign | 0.051 | Stabilizing | 0.013 | N | 0.113 | neutral | None | None | None | None | I |
T/F | 0.3783 | ambiguous | 0.3085 | benign | -0.858 | Destabilizing | 0.981 | D | 0.497 | neutral | None | None | None | None | I |
T/G | 0.2432 | likely_benign | 0.1952 | benign | -0.993 | Destabilizing | 0.329 | N | 0.463 | neutral | None | None | None | None | I |
T/H | 0.2726 | likely_benign | 0.2236 | benign | -1.268 | Destabilizing | 0.944 | D | 0.477 | neutral | None | None | None | None | I |
T/I | 0.3523 | ambiguous | 0.3093 | benign | -0.165 | Destabilizing | 0.927 | D | 0.439 | neutral | N | 0.496818015 | None | None | I |
T/K | 0.19 | likely_benign | 0.1607 | benign | -0.612 | Destabilizing | 0.329 | N | 0.415 | neutral | None | None | None | None | I |
T/L | 0.1504 | likely_benign | 0.1284 | benign | -0.165 | Destabilizing | 0.704 | D | 0.416 | neutral | None | None | None | None | I |
T/M | 0.1277 | likely_benign | 0.1114 | benign | 0.095 | Stabilizing | 0.981 | D | 0.427 | neutral | None | None | None | None | I |
T/N | 0.1189 | likely_benign | 0.1018 | benign | -0.508 | Destabilizing | 0.642 | D | 0.309 | neutral | N | 0.494406951 | None | None | I |
T/P | 0.3253 | likely_benign | 0.2844 | benign | -0.324 | Destabilizing | 0.784 | D | 0.437 | neutral | D | 0.556692335 | None | None | I |
T/Q | 0.1925 | likely_benign | 0.1696 | benign | -0.644 | Destabilizing | 0.085 | N | 0.132 | neutral | None | None | None | None | I |
T/R | 0.1609 | likely_benign | 0.1372 | benign | -0.417 | Destabilizing | 0.704 | D | 0.44 | neutral | None | None | None | None | I |
T/S | 0.1118 | likely_benign | 0.0961 | benign | -0.81 | Destabilizing | 0.023 | N | 0.121 | neutral | N | 0.466986724 | None | None | I |
T/V | 0.2616 | likely_benign | 0.2323 | benign | -0.324 | Destabilizing | 0.704 | D | 0.302 | neutral | None | None | None | None | I |
T/W | 0.715 | likely_pathogenic | 0.6307 | pathogenic | -0.804 | Destabilizing | 0.995 | D | 0.499 | neutral | None | None | None | None | I |
T/Y | 0.4024 | ambiguous | 0.3329 | benign | -0.565 | Destabilizing | 0.981 | D | 0.504 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.