Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4860 | 14803;14804;14805 | chr2:178735868;178735867;178735866 | chr2:179600595;179600594;179600593 |
N2AB | 4543 | 13852;13853;13854 | chr2:178735868;178735867;178735866 | chr2:179600595;179600594;179600593 |
N2A | 3616 | 11071;11072;11073 | chr2:178735868;178735867;178735866 | chr2:179600595;179600594;179600593 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.006 | N | 0.166 | 0.123 | 0.117506650769 | gnomAD-4.0.0 | 6.84193E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99439E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1592 | likely_benign | 0.1319 | benign | -0.096 | Destabilizing | None | N | 0.075 | neutral | None | None | None | None | I |
Q/C | 0.5978 | likely_pathogenic | 0.4399 | ambiguous | 0.102 | Stabilizing | 0.497 | N | 0.267 | neutral | None | None | None | None | I |
Q/D | 0.2222 | likely_benign | 0.1696 | benign | -0.051 | Destabilizing | 0.009 | N | 0.161 | neutral | None | None | None | None | I |
Q/E | 0.0667 | likely_benign | 0.0625 | benign | -0.104 | Destabilizing | 0.003 | N | 0.167 | neutral | N | 0.341047041 | None | None | I |
Q/F | 0.6201 | likely_pathogenic | 0.5012 | ambiguous | -0.47 | Destabilizing | 0.044 | N | 0.366 | neutral | None | None | None | None | I |
Q/G | 0.1751 | likely_benign | 0.1387 | benign | -0.221 | Destabilizing | 0.004 | N | 0.173 | neutral | None | None | None | None | I |
Q/H | 0.1674 | likely_benign | 0.1255 | benign | -0.075 | Destabilizing | None | N | 0.133 | neutral | N | 0.507018696 | None | None | I |
Q/I | 0.3845 | ambiguous | 0.2987 | benign | 0.134 | Stabilizing | 0.044 | N | 0.371 | neutral | None | None | None | None | I |
Q/K | 0.0861 | likely_benign | 0.0736 | benign | 0.086 | Stabilizing | 0.006 | N | 0.166 | neutral | N | 0.429288641 | None | None | I |
Q/L | 0.1308 | likely_benign | 0.1123 | benign | 0.134 | Stabilizing | 0.014 | N | 0.198 | neutral | N | 0.478676647 | None | None | I |
Q/M | 0.3629 | ambiguous | 0.3031 | benign | 0.242 | Stabilizing | 0.497 | N | 0.278 | neutral | None | None | None | None | I |
Q/N | 0.2137 | likely_benign | 0.1599 | benign | -0.14 | Destabilizing | None | N | 0.074 | neutral | None | None | None | None | I |
Q/P | 0.1269 | likely_benign | 0.1006 | benign | 0.082 | Stabilizing | 0.065 | N | 0.291 | neutral | N | 0.514475866 | None | None | I |
Q/R | 0.0907 | likely_benign | 0.0797 | benign | 0.265 | Stabilizing | 0.014 | N | 0.262 | neutral | N | 0.433104957 | None | None | I |
Q/S | 0.1799 | likely_benign | 0.143 | benign | -0.131 | Destabilizing | None | N | 0.068 | neutral | None | None | None | None | I |
Q/T | 0.1654 | likely_benign | 0.1318 | benign | -0.054 | Destabilizing | None | N | 0.089 | neutral | None | None | None | None | I |
Q/V | 0.2724 | likely_benign | 0.2127 | benign | 0.082 | Stabilizing | 0.018 | N | 0.189 | neutral | None | None | None | None | I |
Q/W | 0.3631 | ambiguous | 0.28 | benign | -0.527 | Destabilizing | 0.788 | D | 0.253 | neutral | None | None | None | None | I |
Q/Y | 0.383 | ambiguous | 0.2811 | benign | -0.238 | Destabilizing | 0.022 | N | 0.342 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.