Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4861 | 14806;14807;14808 | chr2:178735865;178735864;178735863 | chr2:179600592;179600591;179600590 |
N2AB | 4544 | 13855;13856;13857 | chr2:178735865;178735864;178735863 | chr2:179600592;179600591;179600590 |
N2A | 3617 | 11074;11075;11076 | chr2:178735865;178735864;178735863 | chr2:179600592;179600591;179600590 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs566100734 | None | 0.805 | D | 0.701 | 0.815 | 0.0954503805726 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85796E-06 | 0 | 0 |
D/V | rs566100734 | 2.747 | 0.983 | D | 0.854 | 0.852 | 0.195762928549 | gnomAD-2.1.1 | 4.64E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.92157E-04 | None | 0 | 7.8E-06 | 0 |
D/V | rs566100734 | 2.747 | 0.983 | D | 0.854 | 0.852 | 0.195762928549 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/V | rs566100734 | 2.747 | 0.983 | D | 0.854 | 0.852 | 0.195762928549 | gnomAD-4.0.0 | 3.45855E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39269E-06 | 3.48413E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6544 | likely_pathogenic | 0.5502 | ambiguous | 0.612 | Stabilizing | 0.892 | D | 0.798 | deleterious | D | 0.711650531 | None | None | N |
D/C | 0.8929 | likely_pathogenic | 0.8394 | pathogenic | 0.374 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
D/E | 0.4794 | ambiguous | 0.3967 | ambiguous | -0.551 | Destabilizing | 0.892 | D | 0.628 | neutral | D | 0.663240541 | None | None | N |
D/F | 0.932 | likely_pathogenic | 0.8846 | pathogenic | 1.347 | Stabilizing | 0.987 | D | 0.849 | deleterious | None | None | None | None | N |
D/G | 0.5349 | ambiguous | 0.4402 | ambiguous | 0.16 | Stabilizing | 0.805 | D | 0.701 | prob.neutral | D | 0.782618466 | None | None | N |
D/H | 0.5754 | likely_pathogenic | 0.4484 | ambiguous | 1.044 | Stabilizing | 0.025 | N | 0.523 | neutral | D | 0.56628007 | None | None | N |
D/I | 0.9197 | likely_pathogenic | 0.8707 | pathogenic | 1.817 | Stabilizing | 0.987 | D | 0.837 | deleterious | None | None | None | None | N |
D/K | 0.8493 | likely_pathogenic | 0.8001 | pathogenic | 0.375 | Stabilizing | 0.975 | D | 0.777 | deleterious | None | None | None | None | N |
D/L | 0.8896 | likely_pathogenic | 0.8393 | pathogenic | 1.817 | Stabilizing | 0.987 | D | 0.853 | deleterious | None | None | None | None | N |
D/M | 0.9342 | likely_pathogenic | 0.8935 | pathogenic | 2.033 | Highly Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
D/N | 0.2707 | likely_benign | 0.2065 | benign | -0.493 | Destabilizing | 0.025 | N | 0.379 | neutral | D | 0.615645611 | None | None | N |
D/P | 0.9863 | likely_pathogenic | 0.9792 | pathogenic | 1.446 | Stabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
D/Q | 0.7218 | likely_pathogenic | 0.6285 | pathogenic | -0.158 | Destabilizing | 0.975 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/R | 0.9013 | likely_pathogenic | 0.8668 | pathogenic | 0.425 | Stabilizing | 0.975 | D | 0.83 | deleterious | None | None | None | None | N |
D/S | 0.4589 | ambiguous | 0.3572 | ambiguous | -0.707 | Destabilizing | 0.845 | D | 0.647 | neutral | None | None | None | None | N |
D/T | 0.8314 | likely_pathogenic | 0.7498 | pathogenic | -0.289 | Destabilizing | 0.975 | D | 0.788 | deleterious | None | None | None | None | N |
D/V | 0.8056 | likely_pathogenic | 0.7321 | pathogenic | 1.446 | Stabilizing | 0.983 | D | 0.854 | deleterious | D | 0.747288915 | None | None | N |
D/W | 0.9782 | likely_pathogenic | 0.9653 | pathogenic | 1.388 | Stabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
D/Y | 0.5423 | ambiguous | 0.4494 | ambiguous | 1.622 | Stabilizing | 0.967 | D | 0.853 | deleterious | D | 0.643659131 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.