Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4865 | 14818;14819;14820 | chr2:178735853;178735852;178735851 | chr2:179600580;179600579;179600578 |
N2AB | 4548 | 13867;13868;13869 | chr2:178735853;178735852;178735851 | chr2:179600580;179600579;179600578 |
N2A | 3621 | 11086;11087;11088 | chr2:178735853;178735852;178735851 | chr2:179600580;179600579;179600578 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.869 | 0.891 | 0.891075467594 | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69835E-06 | 0 | 0 |
Y/N | None | None | 1.0 | D | 0.882 | 0.895 | 0.923081794222 | gnomAD-4.0.0 | 2.05265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9759 | likely_pathogenic | 0.9747 | pathogenic | -2.17 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.732 | likely_pathogenic | 0.7407 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.820911818 | None | None | N |
Y/D | 0.9925 | likely_pathogenic | 0.9936 | pathogenic | -2.867 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.820911818 | None | None | N |
Y/E | 0.9964 | likely_pathogenic | 0.9964 | pathogenic | -2.614 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/F | 0.1473 | likely_benign | 0.1224 | benign | -0.678 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | D | 0.644997618 | None | None | N |
Y/G | 0.9759 | likely_pathogenic | 0.9738 | pathogenic | -2.63 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/H | 0.9137 | likely_pathogenic | 0.9039 | pathogenic | -2.011 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.821550483 | None | None | N |
Y/I | 0.7119 | likely_pathogenic | 0.715 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Y/K | 0.9952 | likely_pathogenic | 0.9951 | pathogenic | -1.718 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/L | 0.6981 | likely_pathogenic | 0.6961 | pathogenic | -0.65 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
Y/M | 0.9355 | likely_pathogenic | 0.929 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/N | 0.9547 | likely_pathogenic | 0.9546 | pathogenic | -2.661 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.820911818 | None | None | N |
Y/P | 0.9922 | likely_pathogenic | 0.9929 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Y/Q | 0.9931 | likely_pathogenic | 0.9923 | pathogenic | -2.199 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/R | 0.9804 | likely_pathogenic | 0.9786 | pathogenic | -2.032 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/S | 0.9487 | likely_pathogenic | 0.9474 | pathogenic | -2.954 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.820911818 | None | None | N |
Y/T | 0.9738 | likely_pathogenic | 0.9731 | pathogenic | -2.55 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/V | 0.6629 | likely_pathogenic | 0.6632 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/W | 0.7502 | likely_pathogenic | 0.728 | pathogenic | -0.073 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.