Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4870 | 14833;14834;14835 | chr2:178735838;178735837;178735836 | chr2:179600565;179600564;179600563 |
N2AB | 4553 | 13882;13883;13884 | chr2:178735838;178735837;178735836 | chr2:179600565;179600564;179600563 |
N2A | 3626 | 11101;11102;11103 | chr2:178735838;178735837;178735836 | chr2:179600565;179600564;179600563 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.999 | D | 0.823 | 0.464 | 0.769190748641 | gnomAD-4.0.0 | 1.59142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1078 | likely_benign | 0.1055 | benign | -0.672 | Destabilizing | 0.973 | D | 0.513 | neutral | N | 0.509043974 | None | None | N |
S/C | 0.2264 | likely_benign | 0.2091 | benign | -0.667 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.627168469 | None | None | N |
S/D | 0.8259 | likely_pathogenic | 0.7778 | pathogenic | -0.967 | Destabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
S/E | 0.7792 | likely_pathogenic | 0.7311 | pathogenic | -0.977 | Destabilizing | 0.996 | D | 0.67 | neutral | None | None | None | None | N |
S/F | 0.3418 | ambiguous | 0.3015 | benign | -0.948 | Destabilizing | 0.999 | D | 0.823 | deleterious | D | 0.554772329 | None | None | N |
S/G | 0.2032 | likely_benign | 0.1844 | benign | -0.896 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | N |
S/H | 0.6416 | likely_pathogenic | 0.5878 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
S/I | 0.3131 | likely_benign | 0.2928 | benign | -0.183 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
S/K | 0.8818 | likely_pathogenic | 0.8465 | pathogenic | -0.83 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
S/L | 0.172 | likely_benign | 0.1638 | benign | -0.183 | Destabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/M | 0.3395 | likely_benign | 0.3125 | benign | 0.161 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
S/N | 0.3603 | ambiguous | 0.3148 | benign | -0.874 | Destabilizing | 0.996 | D | 0.673 | neutral | None | None | None | None | N |
S/P | 0.971 | likely_pathogenic | 0.971 | pathogenic | -0.314 | Destabilizing | 0.999 | D | 0.752 | deleterious | D | 0.687819398 | None | None | N |
S/Q | 0.7144 | likely_pathogenic | 0.6611 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
S/R | 0.7994 | likely_pathogenic | 0.751 | pathogenic | -0.618 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
S/T | 0.1151 | likely_benign | 0.1061 | benign | -0.816 | Destabilizing | 0.543 | D | 0.358 | neutral | N | 0.490549507 | None | None | N |
S/V | 0.2836 | likely_benign | 0.2615 | benign | -0.314 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/W | 0.5638 | ambiguous | 0.5369 | ambiguous | -0.938 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/Y | 0.3482 | ambiguous | 0.3267 | benign | -0.652 | Destabilizing | 0.999 | D | 0.818 | deleterious | D | 0.567472252 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.