Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4871 | 14836;14837;14838 | chr2:178735835;178735834;178735833 | chr2:179600562;179600561;179600560 |
N2AB | 4554 | 13885;13886;13887 | chr2:178735835;178735834;178735833 | chr2:179600562;179600561;179600560 |
N2A | 3627 | 11104;11105;11106 | chr2:178735835;178735834;178735833 | chr2:179600562;179600561;179600560 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1182104962 | None | 1.0 | D | 0.713 | 0.588 | 0.27855597813 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
N/K | rs1182104962 | None | 1.0 | D | 0.713 | 0.588 | 0.27855597813 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
N/K | rs1182104962 | None | 1.0 | D | 0.713 | 0.588 | 0.27855597813 | gnomAD-4.0.0 | 6.57229E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9856 | likely_pathogenic | 0.9835 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
N/C | 0.9225 | likely_pathogenic | 0.9025 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
N/D | 0.9464 | likely_pathogenic | 0.9401 | pathogenic | -1.268 | Destabilizing | 0.999 | D | 0.611 | neutral | D | 0.76427153 | None | None | I |
N/E | 0.9961 | likely_pathogenic | 0.9952 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
N/F | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
N/G | 0.9492 | likely_pathogenic | 0.9436 | pathogenic | -1.48 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | I |
N/H | 0.9512 | likely_pathogenic | 0.942 | pathogenic | -1.141 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.766670733 | None | None | I |
N/I | 0.9881 | likely_pathogenic | 0.9871 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.767405593 | None | None | I |
N/K | 0.9964 | likely_pathogenic | 0.9955 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | D | 0.76576111 | None | None | I |
N/L | 0.9622 | likely_pathogenic | 0.9579 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/M | 0.9874 | likely_pathogenic | 0.9862 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
N/P | 0.9936 | likely_pathogenic | 0.9917 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
N/Q | 0.9944 | likely_pathogenic | 0.9934 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/R | 0.9939 | likely_pathogenic | 0.9923 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
N/S | 0.503 | ambiguous | 0.4894 | ambiguous | -1.122 | Destabilizing | 0.999 | D | 0.585 | neutral | D | 0.567967795 | None | None | I |
N/T | 0.884 | likely_pathogenic | 0.8736 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | D | 0.66317436 | None | None | I |
N/V | 0.9779 | likely_pathogenic | 0.9742 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
N/W | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
N/Y | 0.9886 | likely_pathogenic | 0.9863 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.766670733 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.