Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 4872 | 14839;14840;14841 | chr2:178735832;178735831;178735830 | chr2:179600559;179600558;179600557 |
N2AB | 4555 | 13888;13889;13890 | chr2:178735832;178735831;178735830 | chr2:179600559;179600558;179600557 |
N2A | 3628 | 11107;11108;11109 | chr2:178735832;178735831;178735830 | chr2:179600559;179600558;179600557 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.134 | N | 0.324 | 0.141 | 0.249502417897 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
K/N | rs771719584 | 0.229 | 0.92 | N | 0.431 | 0.258 | 0.173771789658 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/N | rs771719584 | 0.229 | 0.92 | N | 0.431 | 0.258 | 0.173771789658 | gnomAD-4.0.0 | 4.10548E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49735E-06 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4911 | ambiguous | 0.4903 | ambiguous | -0.115 | Destabilizing | 0.759 | D | 0.421 | neutral | None | None | None | None | I |
K/C | 0.86 | likely_pathogenic | 0.8407 | pathogenic | -0.499 | Destabilizing | 0.999 | D | 0.469 | neutral | None | None | None | None | I |
K/D | 0.702 | likely_pathogenic | 0.7521 | pathogenic | -0.115 | Destabilizing | 0.884 | D | 0.453 | neutral | None | None | None | None | I |
K/E | 0.3123 | likely_benign | 0.3249 | benign | -0.105 | Destabilizing | 0.134 | N | 0.324 | neutral | N | 0.407515966 | None | None | I |
K/F | 0.9023 | likely_pathogenic | 0.9113 | pathogenic | -0.424 | Destabilizing | 0.997 | D | 0.454 | neutral | None | None | None | None | I |
K/G | 0.6899 | likely_pathogenic | 0.7078 | pathogenic | -0.271 | Destabilizing | 0.939 | D | 0.453 | neutral | None | None | None | None | I |
K/H | 0.4646 | ambiguous | 0.4636 | ambiguous | -0.416 | Destabilizing | 0.997 | D | 0.457 | neutral | None | None | None | None | I |
K/I | 0.4476 | ambiguous | 0.4397 | ambiguous | 0.217 | Stabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | I |
K/L | 0.5106 | ambiguous | 0.5087 | ambiguous | 0.217 | Stabilizing | 0.969 | D | 0.486 | neutral | None | None | None | None | I |
K/M | 0.3847 | ambiguous | 0.3706 | ambiguous | -0.147 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.503377941 | None | None | I |
K/N | 0.5685 | likely_pathogenic | 0.6072 | pathogenic | -0.073 | Destabilizing | 0.92 | D | 0.431 | neutral | N | 0.480226906 | None | None | I |
K/P | 0.7107 | likely_pathogenic | 0.6745 | pathogenic | 0.132 | Stabilizing | 0.991 | D | 0.435 | neutral | None | None | None | None | I |
K/Q | 0.2186 | likely_benign | 0.2181 | benign | -0.168 | Destabilizing | 0.92 | D | 0.447 | neutral | N | 0.479088522 | None | None | I |
K/R | 0.0988 | likely_benign | 0.0958 | benign | -0.12 | Destabilizing | 0.92 | D | 0.454 | neutral | N | 0.402287824 | None | None | I |
K/S | 0.5552 | ambiguous | 0.5913 | pathogenic | -0.48 | Destabilizing | 0.2 | N | 0.254 | neutral | None | None | None | None | I |
K/T | 0.2576 | likely_benign | 0.2595 | benign | -0.331 | Destabilizing | 0.852 | D | 0.473 | neutral | N | 0.460788486 | None | None | I |
K/V | 0.4416 | ambiguous | 0.4382 | ambiguous | 0.132 | Stabilizing | 0.969 | D | 0.455 | neutral | None | None | None | None | I |
K/W | 0.9032 | likely_pathogenic | 0.9079 | pathogenic | -0.508 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
K/Y | 0.7638 | likely_pathogenic | 0.7629 | pathogenic | -0.151 | Destabilizing | 0.997 | D | 0.472 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.